Ursus maritimus (polar bear): 103668824
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Entry
103668824 CDS
T03271
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X2
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr04612
Antigen processing and presentation
umr05145
Toxoplasmosis
umr05152
Tuberculosis
umr05164
Influenza A
umr05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
103668824 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103668824 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
103668824 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
103668824 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
103668824 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
umr01001
]
103668824 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
umr04054
]
103668824 (CIITA)
Enzymes [BR:
umr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103668824 (CIITA)
Protein kinases [BR:
umr01001
]
Serine/threonine kinases: Other
TAF1 family
103668824 (CIITA)
Pattern recognition receptors [BR:
umr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103668824 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
Motif
Other DBs
NCBI-GeneID:
103668824
NCBI-ProteinID:
XP_008695350
UniProt:
A0A384CLN3
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MRCLAPRPAGSYLPEPQGSGQCATMELGPLEGGYLELLNSSADPLQLYHLYDQTDLAREE
IELCSEPDMDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDSQLDGLGKDIFIE
HIGLEEMISESVEVEEAGQKSQKRPFPEELPVDLKHRKLAEPLAVPVVTGTFLVGSVSDS
SALPCLSPPAVFNKEPASSQSWLEEPVLMPVPPSSSLLSCLSLPAGRIQIVPSLPSLPQG
LWQISGAGTGVSGMVIYQGEMPQASQVLPSSGPAMQSLPKSPERPGSTSPFAPSAADLPG
MPEPALTSRANMTEDQMSPTQCLTAHEVSSKPPKWPETVEQFCSSLRDKYQAEPAGPEGI
LVEVELVRARLERNSSKSQERELATPDWAERQLARGGLAEVLLAAGDRRRPRETQVIAVL
GKAGQGKSHWAREVSRAWACGQLPQYDFVFYFPCHCLDRVKDTYRLQDLLFCLGPQPQPV
DEEVFGHILRRPDRVLLILDAFEGLEGQDSLLHSAGGPVSTEPHSLRGLLAGLFQRKLLR
GCTLLLTARPRGRLAQSLSKADVLFEVTGFSAEQAETYVTRYLERAGATEHREQALALLH
GQPFLLSHSHSPTVCRAVCRLSEALLEPGGEAELPSTLTGLYVGLLGPAARDSPPGALAG
LARLAWELGRRHRGTLQDSQFPSAEVRAWAVARGLVQPIPGAPDTELAFSSFLLQCFLGA
VWLALSTEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLLFQPHADCLGALAGPAVA
ALGARKQKVLSRYLKRLQPGTLRAGRLLELLHCAHEASDAGLWQHVVQGLPARLSFLGTR
LTPPNTYVLCSALAAAGRDFSLDLRSTGIDPSGLGSLVGLGCVTHFRWGQGSGGRASAVV
LALCPVLGTPVGSHLVCVVARRGRK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcctggctccacgccctgcagggtcctacctgccggagccccaaggcagtgga
cagtgtgccaccatggagttggggcctctagaaggcgggtacctggagcttctcaacagc
agtgccgatcccttgcagctctaccacctctatgaccagacagacctggctagagaagag
attgagctctgctcagaacccgacatggacaccatcaactgcgaacagttcagcagactg
ttgtgtgacatggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactg
gaccagtatgtgttccaggactcccaactggacggtctgggcaaagacattttcattgag
cacataggattggaagaaatgatcagtgagagtgtggaggtggaggaagcagggcagaaa
agtcagaaaagacccttcccagaggaactgcccgtggacttgaagcacaggaagctggct
gagcccctcgctgtgcctgtggtgactggcacgttcctggttgggtcagtgagtgactcc
tcagccctgccctgcctgtcaccacctgccgtgttcaacaaggagccagcatccagccag
agctggctggaggagcccgtcctgatgcctgtgcccccttccagttccttgctgagctgc
ctgagtcttcctgctggacgcatccagatcgtccccagcctcccctccctgccccaggga
ctctggcaaatctcaggggctgggacaggggtgtctgggatggtcatctatcaaggcgag
atgccccaggccagccaagtgcttccttccagtggccccgccatgcagagcctccccaaa
tccccagagcggcccggctccaccagcccctttgcgccgtctgcagctgaccttcctggc
atgccagagccggctttgacctcccgggcaaatatgaccgaggaccagatgtcccctacg
caatgcctgacagctcacgaggtctccagcaagcctccgaaatggcctgagacggtggag
cagttctgcagctccctacgggacaagtaccaggctgagcccgcaggcccggaaggcatc
ctggtggaggtggagctggtgagggcgcggcttgaaagaaacagcagcaagagccaggag
agggagctggccaccccggactgggcagagcggcagctggcccgtggggggctggccgag
gtgctgctagctgcgggggaccgacggcggccgcgggagacacaggtgatcgccgtgctg
ggcaaagcaggacagggcaagagccactgggcccgggaagtgagccgagcctgggcctgc
ggccagctgccccagtacgacttcgtcttctacttcccctgccactgtttggaccgtgtg
aaggacacttaccgcctgcaggatctgctcttctgcctgggcccccagccacagcccgtg
gacgaggaggtcttcggccacatcttgaggaggcctgaccgggttctgctcatcctggac
gccttcgaggggctcgagggccaagacagcctcctgcacagcgcgggtggacctgtgtcc
actgagccccactccctccgggggctgctggccggtctcttccagcgaaagctgctgcga
ggctgcaccctgctgctcacggcccggccccggggccgcctggcccagagcctgagcaag
gccgacgtcctgttcgaggtgaccggcttctcagccgagcaggccgagacctatgtgaca
cgctacttggagcgcgctggggcgaccgagcaccgagagcaagccctggcgctcctccac
ggccagccgttcctgctcagccacagccacagccccactgtgtgccgggccgtgtgccgg
ctctccgaggccctcctggagccgggcggcgaggctgagctgccctccacgctcacggga
ctctacgtgggcctgctgggccctgcggcccgcgacagccccccgggggctctggcagga
ctggccaggctggcgtgggagctgggccgcagacaccggggcaccctgcaggacagccag
ttcccgtcggcggaggtgagagcctgggccgtggccagaggcctggtgcagcccatcccg
ggggccccggacacggagctggccttctccagcttcctcctgcagtgcttcctgggggcc
gtgtggctggcgctgagcacggaaatcaaggacaaggagctgccacagtacttggcattg
accccgaggaagaagaggccctacgacaactggctggagggcgtgccgcgcttcctggct
gggctgctgttccagccccacgccgactgcctcggagccctggccgggccggcagtggcc
gccttgggggccaggaagcagaaggtgctcagcaggtaccttaagcggctgcagccaggg
acgctacgggccggccggctgctggagctgctgcactgtgcccacgaagcttcggacgcc
gggctctggcagcacgtggttcaggggctcccagcccgcctctccttcctgggcacccgg
ctcacaccccccaacacttacgtgctgtgcagtgccttggcagcggcgggccgagacttc
tccctggacctccgcagcacgggcattgacccctctgggctggggagccttgtgggactc
ggctgtgtcacccatttcaggtgggggcaggggagcggggggagggcttccgctgtggtc
ttggcgctgtgcccggtgctgggcacccctgtggggtctcatttagtatgcgtggtagcc
aggcgggggcggaagtga
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