| Entry |
|
|---|
| Symbol |
CIITA
|
|---|
| Name |
(RefSeq) MHC class II transactivator isoform X2
|
|---|
| KO |
|
|---|
| Organism |
umr Ursus maritimus (polar bear)
|
|---|
| Pathway |
| umr04612 | Antigen processing and presentation |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:umr00001]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
103668824 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103668824 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
103668824 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
103668824 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
103668824 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:umr01001]
103668824 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:umr04054]
103668824 (CIITA)
Enzymes [BR:umr01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103668824 (CIITA)
Protein kinases [BR:umr01001]
Serine/threonine kinases: Other
TAF1 family
103668824 (CIITA)
Pattern recognition receptors [BR:umr04054]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103668824 (CIITA)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
925 aa
MRCLAPRPAGSYLPEPQGSGQCATMELGPLEGGYLELLNSSADPLQLYHLYDQTDLAREE
IELCSEPDMDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDSQLDGLGKDIFIE
HIGLEEMISESVEVEEAGQKSQKRPFPEELPVDLKHRKLAEPLAVPVVTGTFLVGSVSDS
SALPCLSPPAVFNKEPASSQSWLEEPVLMPVPPSSSLLSCLSLPAGRIQIVPSLPSLPQG
LWQISGAGTGVSGMVIYQGEMPQASQVLPSSGPAMQSLPKSPERPGSTSPFAPSAADLPG
MPEPALTSRANMTEDQMSPTQCLTAHEVSSKPPKWPETVEQFCSSLRDKYQAEPAGPEGI
LVEVELVRARLERNSSKSQERELATPDWAERQLARGGLAEVLLAAGDRRRPRETQVIAVL
GKAGQGKSHWAREVSRAWACGQLPQYDFVFYFPCHCLDRVKDTYRLQDLLFCLGPQPQPV
DEEVFGHILRRPDRVLLILDAFEGLEGQDSLLHSAGGPVSTEPHSLRGLLAGLFQRKLLR
GCTLLLTARPRGRLAQSLSKADVLFEVTGFSAEQAETYVTRYLERAGATEHREQALALLH
GQPFLLSHSHSPTVCRAVCRLSEALLEPGGEAELPSTLTGLYVGLLGPAARDSPPGALAG
LARLAWELGRRHRGTLQDSQFPSAEVRAWAVARGLVQPIPGAPDTELAFSSFLLQCFLGA
VWLALSTEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLLFQPHADCLGALAGPAVA
ALGARKQKVLSRYLKRLQPGTLRAGRLLELLHCAHEASDAGLWQHVVQGLPARLSFLGTR
LTPPNTYVLCSALAAAGRDFSLDLRSTGIDPSGLGSLVGLGCVTHFRWGQGSGGRASAVV
LALCPVLGTPVGSHLVCVVARRGRK |
|---|
| NT seq |
2778 nt +upstreamnt +downstreamnt
atgcgttgcctggctccacgccctgcagggtcctacctgccggagccccaaggcagtgga
cagtgtgccaccatggagttggggcctctagaaggcgggtacctggagcttctcaacagc
agtgccgatcccttgcagctctaccacctctatgaccagacagacctggctagagaagag
attgagctctgctcagaacccgacatggacaccatcaactgcgaacagttcagcagactg
ttgtgtgacatggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactg
gaccagtatgtgttccaggactcccaactggacggtctgggcaaagacattttcattgag
cacataggattggaagaaatgatcagtgagagtgtggaggtggaggaagcagggcagaaa
agtcagaaaagacccttcccagaggaactgcccgtggacttgaagcacaggaagctggct
gagcccctcgctgtgcctgtggtgactggcacgttcctggttgggtcagtgagtgactcc
tcagccctgccctgcctgtcaccacctgccgtgttcaacaaggagccagcatccagccag
agctggctggaggagcccgtcctgatgcctgtgcccccttccagttccttgctgagctgc
ctgagtcttcctgctggacgcatccagatcgtccccagcctcccctccctgccccaggga
ctctggcaaatctcaggggctgggacaggggtgtctgggatggtcatctatcaaggcgag
atgccccaggccagccaagtgcttccttccagtggccccgccatgcagagcctccccaaa
tccccagagcggcccggctccaccagcccctttgcgccgtctgcagctgaccttcctggc
atgccagagccggctttgacctcccgggcaaatatgaccgaggaccagatgtcccctacg
caatgcctgacagctcacgaggtctccagcaagcctccgaaatggcctgagacggtggag
cagttctgcagctccctacgggacaagtaccaggctgagcccgcaggcccggaaggcatc
ctggtggaggtggagctggtgagggcgcggcttgaaagaaacagcagcaagagccaggag
agggagctggccaccccggactgggcagagcggcagctggcccgtggggggctggccgag
gtgctgctagctgcgggggaccgacggcggccgcgggagacacaggtgatcgccgtgctg
ggcaaagcaggacagggcaagagccactgggcccgggaagtgagccgagcctgggcctgc
ggccagctgccccagtacgacttcgtcttctacttcccctgccactgtttggaccgtgtg
aaggacacttaccgcctgcaggatctgctcttctgcctgggcccccagccacagcccgtg
gacgaggaggtcttcggccacatcttgaggaggcctgaccgggttctgctcatcctggac
gccttcgaggggctcgagggccaagacagcctcctgcacagcgcgggtggacctgtgtcc
actgagccccactccctccgggggctgctggccggtctcttccagcgaaagctgctgcga
ggctgcaccctgctgctcacggcccggccccggggccgcctggcccagagcctgagcaag
gccgacgtcctgttcgaggtgaccggcttctcagccgagcaggccgagacctatgtgaca
cgctacttggagcgcgctggggcgaccgagcaccgagagcaagccctggcgctcctccac
ggccagccgttcctgctcagccacagccacagccccactgtgtgccgggccgtgtgccgg
ctctccgaggccctcctggagccgggcggcgaggctgagctgccctccacgctcacggga
ctctacgtgggcctgctgggccctgcggcccgcgacagccccccgggggctctggcagga
ctggccaggctggcgtgggagctgggccgcagacaccggggcaccctgcaggacagccag
ttcccgtcggcggaggtgagagcctgggccgtggccagaggcctggtgcagcccatcccg
ggggccccggacacggagctggccttctccagcttcctcctgcagtgcttcctgggggcc
gtgtggctggcgctgagcacggaaatcaaggacaaggagctgccacagtacttggcattg
accccgaggaagaagaggccctacgacaactggctggagggcgtgccgcgcttcctggct
gggctgctgttccagccccacgccgactgcctcggagccctggccgggccggcagtggcc
gccttgggggccaggaagcagaaggtgctcagcaggtaccttaagcggctgcagccaggg
acgctacgggccggccggctgctggagctgctgcactgtgcccacgaagcttcggacgcc
gggctctggcagcacgtggttcaggggctcccagcccgcctctccttcctgggcacccgg
ctcacaccccccaacacttacgtgctgtgcagtgccttggcagcggcgggccgagacttc
tccctggacctccgcagcacgggcattgacccctctgggctggggagccttgtgggactc
ggctgtgtcacccatttcaggtgggggcaggggagcggggggagggcttccgctgtggtc
ttggcgctgtgcccggtgctgggcacccctgtggggtctcatttagtatgcgtggtagcc
aggcgggggcggaagtga |
|---|
