Ursus maritimus (polar bear): 103669880
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Entry
103669880 CDS
T03271
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03015
mRNA surveillance pathway
umr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103669880 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
103669880 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
umr03019
]
103669880 (PABPC1L)
03041 Spliceosome [BR:
umr03041
]
103669880 (PABPC1L)
Messenger RNA biogenesis [BR:
umr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103669880 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
103669880 (PABPC1L)
Spliceosome [BR:
umr03041
]
Complex C
Other components
Complex C specific factors
103669880 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
103669880
NCBI-ProteinID:
XP_040494317
UniProt:
A0A8M1GHT6
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIKGQPVRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVVCDDHGSRGFGFVHFETHEAAQQAIATMNGMLLNDRKVFVGHFKSRRERE
AELGARAVEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGHSRGFGFVNFEK
HEEAQKAVTDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKN
LDDSIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT
KPLYVALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFQQPASYFLPAVPQPPAQAAY
YASGPSVQPAPRWTAQPPRVSSTYPPAASMVRPPAMLRRPPAQVSSVRQASTQVPPPGPH
TQRVANIGTQTTGASGVAYSTPTGPVLTHKYSSATHNPGVQEPAVRIPGQEPLTASMLAA
APLHEQKQMIGGRGSGSAAGTSGHGADGREHALKPENGIPTASADKRMAFPALGSLSLGT
VTSFPMGLRLYLSSVCGRKASHPASLSPVALCIKSAANSVLSPMRPSCV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggcccgggctacccgctcgcctcgctctacgtgggcgacctgcacccc
gacgtgaccgaggccatgctgtacgagaagttctcgcccgccggccccatcctgtccatc
cgcgtgtgccgcgacgtggccacccgccgctcgctgggctacgcctacatcaacttccag
cagccggccgacgcggagcgggcgctggacacgatgaactttgaagtgatcaaaggccag
cctgtccgcatcatgtggtcccagcgagacccaggactccgcaagtcgggtgtgggcaac
atcttcatcaagaacctggaggactccattgacaacaaggccttatatgataccttctcc
acctttgggaacatcttgtcttgcaaggtggtgtgtgacgatcatgggtcccggggcttc
ggctttgtccactttgagacccacgaggctgcgcagcaggccattgccaccatgaacggg
atgctgctgaatgaccgcaaagtcttcgtgggccacttcaagtcccgacgggagcgggaa
gcagagctgggagctcgggccgtggagttcaccaacatttatgtgaagaacctccatgtg
gatgtggacgagcagggcctgcaggacctcttctcccagtttgggaaaatgctgagtgtg
aaggtgatgagggacgacatcggccactcccgaggcttcggctttgtcaactttgagaag
cacgaagaagcccagaaggctgtgacggacatgaatggcaaggaggtgagcgggcggctg
ctgtacgtgggccgggcccagaagcgggtggaacggcagaacgagctgaagcgtaggttc
gagcagatgaagcaggaccgggcgacccgttaccagggtgtgaacctgtacgttaagaac
ctggatgactccatcgatgatgagaagctgagaaaagagttctctccctatggcgtgatt
accagcgctaaggtgatgacagagggtggccacagcaaggggtttggctttgtgtgtttt
tcctccccagaagaggcgacgaaggccgtgaccgagatgaacgggcgcatcgtgggcacc
aagccgctgtacgtggcactggcccagcgcaaagaggagcggaaggccatcctgaccaac
cagtacatgcagcgtctctccacggtgcgggctctgggcggccccctcttgggctccttc
cagcagcccgccagctacttcctgcccgccgtgccccagcctccagcccaggctgcgtac
tatgcctccggcccctccgtgcagcccgcccccaggtggacggcccagcctccgagagtc
tcctccacctaccctccagctgcctcaatggtccggccaccagccatgttgcggcgcccc
ccggcccaggtcagcagtgtcaggcaggcctctacccaggtgccacccccggggccccac
acccaaagagtggccaacattggtacccagaccacaggagccagcggggtggcatattct
acccctaccgggcctgtcctgacacacaaatattcctcagcaacacacaaccctggggtg
caggagccggctgtgcgcatcccgggacaggagcccctgacggcgtccatgctggccgcg
gccccactgcacgagcaaaagcagatgattggtggaagaggctctggcagtgctgcaggc
acatcaggccacggagctgacggccgtgaacatgctctgaaaccagaaaatggaatcccc
accgcctcggctgacaagaggatggcgtttcctgctcttggctctctgtccctgggaacc
gtaacttctttccccatggggctgcgtctgtacctgagctctgtatgtggaaggaaggcg
agtcaccccgccagcctgtcacctgttgctttgtgcattaaaagtgctgcaaactctgtc
ctgtctcccatgaggccttcttgtgtctga
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