Entry |
|
Symbol |
NDC1
|
Name |
(RefSeq) nucleoporin NDC1
|
KO |
|
Organism |
umr Ursus maritimus (polar bear)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:umr00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103670872 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103670872 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:umr03019]
103670872 (NDC1)
Messenger RNA biogenesis [BR:umr03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103670872 (NDC1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
674 aa
MATAASRPCAGGSRDILWRVLGWRIVASIVWSVLLLPICTTVFIIFSSIDLFHPIQWLSD
SFNDLYSSYVIFYLLLLSVVVVIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQLMHSFV
HAAMGMLVAWCAAVITKGQYSFLVVPCTGTESLNSPAAQTCLNEYHLFFLLAGAFMGYSY
SLLYFINNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLIRNFCIVYYFLGHIPKA
WISTAMDLQIDEQFHRPLDTVRGLLNLSLLYHVWLCGVFLLMTWYISWILFKIFATEAHL
FPVQPPFSEESDECLPKVLNSSPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPH
NWTAISRECLNLLNDMTQKLVLYQEAAATNGRMVSSYSMEPKKLNSPEETTSQTPKSSHM
ARPSVPPLVKTSLFSSKLSTPDVASPLGSPFGSSVVNRMAGIFDVNTCYGSPQSSQLIRR
GPRLWTSAPDQQMTEFSNPSPSTSVSAESKTARQPSMIYSWIQNKREQVKNFLSKRVLIM
YFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQE
AVDKYFKLPHASSKPPRISGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASA
EHQKRLQQFLEFKE |
NT seq |
2025 nt +upstreamnt +downstreamnt
atggccacggctgcgagtcggccctgcgccggcgggtcgcgggacatcttgtggcgcgtt
ttgggctggcggatagttgcaagtattgtctggtcagtgctgcttctacccatctgtacc
acagtatttataatcttcagcagcattgatttatttcatcctattcagtggctgtctgat
tctttcaatgatctgtatagttcctatgtaatcttttacctcctgctgctgtcagtggta
gtagtaataataagtatttttaatgtggagttctatgcagttgtgccttccattccctgc
tccagactggcactgatagggaagatcattcacccgcagcagctcatgcactcgtttgtc
catgctgcaatgggaatgctggtggcttggtgtgctgcggtgataaccaagggtcaatac
agttttcttgtggttccctgcactggtactgagagtttaaatagccctgctgcacagacc
tgcttaaatgagtatcaccttttttttctcctggctggagcatttatgggctacagctat
agtctcctgtattttattaacaacatgaactatctgccatttcccatcatacagcaatac
aagttcttacgcttcaggagatctctgctcttgttagttaagcatagttgtgtggaatca
ttgttcctgattagaaatttctgcatcgtctattattttcttggccatattcctaaagct
tggattagcactgcgatggaccttcagatagatgagcagtttcacaggcctcttgacact
gtgcgtggcctcttgaatctctcgttactctaccatgtctggctatgtggtgtctttctc
ctgatgacttggtatatctcatggatactcttcaaaatctttgccacagaggctcatctg
ttccctgttcagccaccattttcagaagagtcagatgagtgcctcccgaaggttttgaac
agcagtcctcccctcatcataaagtatttggccttgcaggacctgatgttgctttctcag
tattctccttcacgaagacaagaagtttttagccttagccaaccaggtggacatccccac
aactggacagccatttcaagggagtgtttgaatcttttaaatgatatgactcagaaactg
gttctctaccaagaagctgctgctacgaatgggagaatggtgtcctcatactccatggaa
cccaagaaattgaattctccagaagaaactacttctcagaccccgaaatctagccacatg
gctcggccctcagtgccaccgctagttaagacgtcactgttttcctccaaattatctaca
cctgatgttgcaagtcctctcggaagcccatttggctctagtgttgtgaatcggatggct
ggaatttttgatgtaaatacctgctatgggtcccctcaaagttctcagctgataagaaga
gggccaagattgtggacttctgctccagatcagcaaatgactgaattttctaatccttct
ccatctacctctgttagtgctgagagtaagacagcgagacagcccagtatgatttactca
tggattcagaataaacgtgaacaggttaagaatttcttatcaaaacgggtgctgataatg
tattttttcagtaagcacccagaggcctctattcaggctgttttttcagatgcccaaatg
catatttgggcattagaaggtctgtctcatttagtggcagcatcatttaccgaagataga
tttggagttgtccagactacactacccgctattcttaataccttgttgacgctgcaagag
gcagtcgacaagtacttcaaacttcctcatgcttccagtaaaccaccccggatttcagga
agccttgtggacacttcttataaaacattaagatttgcatttagggcatcactaaaaact
gccatctacagaataactactacattcggcgaacacctgaatgctgtgcaagcatctgca
gaacatcagaaaagacttcagcagttcttggagttcaaagagtag |