Ursus maritimus (polar bear): 103671993
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Entry
103671993 CDS
T03271
Symbol
PABPC5
Name
(RefSeq) polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03015
mRNA surveillance pathway
umr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103671993 (PABPC5)
09123 Folding, sorting and degradation
03018 RNA degradation
103671993 (PABPC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
umr03019
]
103671993 (PABPC5)
03041 Spliceosome [BR:
umr03041
]
103671993 (PABPC5)
Messenger RNA biogenesis [BR:
umr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103671993 (PABPC5)
mRNA cycle factors
Stress granule specific factors
103671993 (PABPC5)
Spliceosome [BR:
umr03041
]
Complex C
Other components
Complex C specific factors
103671993 (PABPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
RRM_3
RBD_DEAH11
DUF4523
TC1
Motif
Other DBs
NCBI-GeneID:
103671993
NCBI-ProteinID:
XP_008698855
UniProt:
A0A384CWK2
LinkDB
All DBs
Position
X
AA seq
382 aa
AA seq
DB search
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKCIDNR
ALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
GVPIYVKNLDETIDDEKLKEEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEDATKAVDE
MNGRTVGSKPLHVTLGQSRRRW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggggagtggagagcctaatcctgctggcaagaaaaagaagtacctaaaggctgccctg
tacgtgggtgacttggacccagatgtcacggaggacatgctatataaaaagttcaggcct
gctggccctctgcgcttcacccgaatctgccgtgaccccgtgacccgcagccccctgggc
tatggctatgttaacttccgctttcctgcagatgctgagtgggccctgaataccatgaat
tttgatttgattaatggcaaacctttccgcctcatgtggtctcagccagatgaccgctta
agaaagtctggagttggaaatatattcatcaaaaacctggacaaatgcatagacaatagg
gcccttttttatttattttctgcttttgggaacattctctcctgcaaggtcgtatgtgat
gacaatggctctaagggttatgcctatgtgcactttgacagcctggccgctgccaataga
gccatctggcacatgaatggagtgcggcttaacaaccgccaggtgtatgttggcagattc
aaattcccagaagagcgggcagctgaagtcagaaccagggatagagcaactttcaccaat
gtctttgttaaaaactttggagatgacatggatgatgaaaaactgaaggaaatctttagt
ggatatgggccaactgagagtgttaaggtaataagagatgccagtgggaaatctaagggc
tttggatttgtgaggtatgagacacacgaggctgcccaaaaggctgtattagacctgcat
ggaaagtccatcaatgggaaagttctatatgtagggcgagcacagaagaaaattgaacga
ttggctgagttaagacgaagatttgaacggctgagattaaaagaaaaaagtcggcctccg
ggggtgcctatctatgttaagaacctggatgagaccatcgatgatgagaaactgaaggag
gaattttcttcctttggatcaattagccgggccaaagtgatggtggaagtagggcaaggc
aaagggtttggtgttgtttgcttctcctcttttgaagatgctaccaaagcagtggatgag
atgaatggtcgcacagtgggctccaagcccctgcatgtaaccctgggccagtccaggcgc
aggtggtga
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