| Entry |
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| Symbol |
SCAF4
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| Name |
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
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| KO |
| K13167 | SR-related and CTD-associated factor 4 |
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| Organism |
umr Ursus maritimus (polar bear)
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| Brite |
KEGG Orthology (KO) [BR:umr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:umr03021]
103673213 (SCAF4)
03041 Spliceosome [BR:umr03041]
103673213 (SCAF4)
Transcription machinery [BR:umr03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103673213 (SCAF4)
Spliceosome [BR:umr03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
103673213 (SCAF4)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1135 aa
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAESVTNNEGSPPPPVKVSSEPPQATTNSVPTVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQLKTAPAQP
PEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDAAAAATATAPAVAVAPPAPS
ATAPTTAPAASPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMTIQQDPVHHQVPLPPNG
QMPGFGLLPTPPFPPMAQSVIPPTPPVQQPFQASFQAQNEPLTQKAHQEMEVEQPCIQEV
KRHLSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDR
EKERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRG
CAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPW
DKVKPEELESFCEGGMLDSDTLNPDWKGIPKKHENEVAQNGGADTSHTEPVSPIPKPLPV
PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPGVPPPPPPPPF
LRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNP
IPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQA
PSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFGMPPPHG
MKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQPQPQQPPPSQPQPQQPPPAQQ
PPPAQQQAQPFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRERRE
WGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRRDKEENRGKEKPEVTDRAGGNKT
VEPPISQVGNVDTVSELDKGESESAVVKSSEELPAEATSSVEPEKDSGSAAEAPR |
|---|
| NT seq |
3408 nt +upstreamnt +downstreamnt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaaccaccc
atctctcgagccaaaatgattcttatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatcgtagaaaagttcatcaagaagtgtaaaccggagtataaggtt
ccgggattatatgtaatcgactcaattgtgcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataactgccacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcaaaaaaat
ggagtattcaaaattgaaattattcaacctcttttggacatggctgcaggaaccagtaat
gctgccccagtagcagaaagtgttactaataatgaaggttcacctccacctccagttaaa
gtttcttctgaaccgccccaagccactacaaactctgtaccaactgtaccacagttgccc
agctctgatgcttttgctgctgtggcccagctgtttcagacaactcaagggcaacagctt
cagcagatccttcagacttttcaacagcctccaaaaccacagtctccggccattgacaat
gctgtgatggctcaggtccaggctatcacagctcagttaaagacagctcctgcacagcca
ccggaacaaaaagctgctttccccccgcctgagcaaaaaactgcatttgacaagaagcta
cttgatagatttgattatgatgatgagccagaagctgtggaagaatcaaagaaggaagat
gctgctgctgctgccaccgccaccgcacctgctgtggctgttgcgcctccagcgccctcc
gccactgcacccaccaccgcacctgctgcttcccctccgcaggcaccctttgggtttcct
ggagatggcatgcagcagccagcatatacacaacatcaaaatatggatcagtttcagcct
cgaatgatgacaatacagcaggatccagtgcaccatcaggttccacttcctcctaatgga
cagatgccaggatttggccttcttcctacacctccatttcctcccatggctcagtctgtg
attcctccaactccacccgtccagcagcctttccaagcttcttttcaggcacagaatgaa
ccacttacacagaaggcacatcaggaaatggaagtagaacaaccttgtattcaagaggtt
aagcggcatttgtctgataacagaaagtcaagatctaggtcagcatccaggtcaccaaaa
agaaggcgatctcgatctggctctagatctcgaaggtcccgtcatcgacgttctcgatct
cggtccagagatagacgccgacattctcctagatctcggtcccaagaaaggcgagatcga
gaaaaagaaagagaacgccgacaaaaaggccttcctcaaatcaaaccagaaactgcgagt
gtttgtagtactacactctgggtgggacagctggacaaaaggactactcaacaggatgtt
gccagtcttttagaagagtttggtccaattgaatcaattaatatgattcctcccagaggt
tgtgcctatattgttatggttcataggcaagatgcttatcgtgccctgcagaaactgagc
cgaggaaactataaagtgaaccagaaatccataaagattgcctgggctttaaacaaagga
ataaaggcagattataagcagtattgggatgtagaactgggtgttacttatattccatgg
gacaaagtcaagcctgaagaactggagagtttttgtgaaggaggaatgttggacagtgat
acacttaatccagattggaagggaatccccaagaagcatgaaaatgaagttgctcaaaat
ggaggggctgacacctcacatacagaaccagtatcacccatacctaaacctttaccagtg
cctgtccctcctattcctgtccctgcacctataacagtgccacctccacaggtcccacca
catcagccgggtcctcctgtagttggtgctctccagccacccactttcacgcctcccttg
ggcattccccctccaggttttggtcctggtgttcctcctccacctcctcctccaccattt
ttgcgcccaggatttaatccgatgcatttaccaccaggttttcttcctcctggaccccca
cctcctataactccaccagtatccattcctcctcctcacactccaccaataagcatccca
aactctactatcgctggtataaatgaagacactacaaaagacttatctattggaaatccc
attccaacagtggtgtctggggctagaggaaacgccgagtctggtgacagtgtgaaaatg
tatggctctgctgtgccacctgctgcacccacgaatctgcccacccctcctgtaacccag
cctgtttcacttcttggtactcaaggagttgcacctggtcctgtaattgggctccaggca
ccatccactggtcttcttggtgcccgacctggcctgatcccacttcagcgccctccggga
atgcctccgcctcacttacagcgatttcctttgatgccacctcgtcccatgccaccgcat
atgatgcatagaggtccacctccaggaccggggggctttggaatgcctccacctcacgga
atgaaaggcccctttccaccgcatggcccctttgttaggcctggcggaatgccagggctt
gggggcccagggccaggcccagggggtcccgaagacagagacggaaggcagcaacaaccg
cagccgcagcagccgcccccgtcgcagccacagccgcagcagccgccaccagcgcagcag
ccgccaccagcgcagcagcaagcacagccgtttagaaatgataacaggcagcagttcaat
tcaggtagagaccaagagaggtttggaagaagatcttttggaaatagggtggaaaatgac
cgggaacggtatgggaaccgtaatgatgatagagataatagtaatcgtgaaaggagagag
tggggaagaaggagccctgaccgggacaggcacagagacttggaagagagaaatagacgc
tctagcgggcatcgagacagagagagagattctagagatagagagtctcgtagagataag
gaagagaaccgaggaaaggagaagcctgaggtgacagacagggcaggtggtaacaaaacc
gttgaacctcccattagccaagtgggaaatgtagacactgtttcagaacttgataagggg
gagtctgagtctgcagttgtaaaatcttctgaagagttacctgctgaggctacctcatcc
gttgaacctgaaaaggattctggctcagcagcagaggctcctcgttag |
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