| Entry |
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| Symbol |
CTCF
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| Name |
(RefSeq) transcriptional repressor CTCF isoform X1
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| KO |
| K23195 | transcriptional repressor CTCF |
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| Organism |
umr Ursus maritimus (polar bear)
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| Brite |
KEGG Orthology (KO) [BR:umr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:umr03000]
103673655 (CTCF)
03036 Chromosome and associated proteins [BR:umr03036]
103673655 (CTCF)
Transcription factors [BR:umr03000]
Eukaryotic type
Zinc finger
Cys2His2 others
103673655 (CTCF)
Chromosome and associated proteins [BR:umr03036]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103673655 (CTCF)
|
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| SSDB |
|
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
727 aa
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPETEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPVEGEEEEAQPAATDAPNGDLTPEM
ILSMMDR |
|---|
| NT seq |
2184 nt +upstreamnt +downstreamnt
atggaaggtgaggcggttgaagccattgtggaagagtctgaaactttcattaaaggaaag
gaaagaaagacttaccagagacgccgggaagggggccaggaagaggatacttgtcacctg
ccccagaaccagactgatgggggtgaggtggtccaggatgtcaatagcagtgtacagatg
gtaatgatggaacagctggatcccacccttcttcagatgaagactgaagtaatggagggt
acagtcgctccagaaacagaggctgctgtggacgatacccagatcataaccttgcaggtt
gtaaatatggaggaacaacccataaacataggagagcttcagcttgtccaagtacccgtt
cccgtgactgtacctgttgccaccacttcagtagaagaacttcagggggcttatgaaaat
gaagtgtctaaagagggccttgcagaaagcgaacccatgatatgtcacaccttacctttg
cctgaagggtttcaagtggtgaaagtgggggccaatggagaggtggagacgctagagcaa
ggggaacttccacctcaagaagatcctagttggcaaaaagacccagattatcagccgcca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggagggcaaagat
gtggatgtgtctgtctacgattttgaggaagagcagcaggagggtctgctgtcggaggtt
aatgcagagaaagtggttggtaacatgaagcctccaaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttacacatgtccacggcgttcaaat
ttggatcgtcacatgaaaagtcacactgatgagagaccacacaagtgccatctctgtggc
agggcattcagaacagtcaccctcctgaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgtgacatggcctttgtgactagtggagaattggtgcggcat
cgtcgttataaacacacccatgagaagccatttaagtgttccatgtgcgattacgccagt
gttgaagtcagcaaattaaaacgtcatattcgctctcatactggggagcgtccgttccag
tgcagcttgtgcagttacgccagcagggacacatacaagctgaaaaggcacatgagaact
cattcaggggaaaaaccttatgaatgttacatttgtcatgctcggtttacccaaagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaagtttcactgtccc
cactgtgacactgtcatagcccgaaaaagtgatttgggtgtccacttgcgaaagcagcat
tcctacattgagcaaggcaagaaatgtcgatactgcgatgctgtgtttcatgagcgctat
gccctcatccagcatcagaagtcgcacaagaacgagaagcgctttaagtgtgaccagtgt
gattacgcttgcagacaggagaggcacatgatcatgcacaagcgcacccacaccggggag
aagccttacgcctgcagccactgcgacaagaccttccgccagaaacagctcctcgacatg
cacttcaaacgctaccatgaccccaactttgtccctgcagcctttgtctgttctaagtgt
gggaaaacctttacacgccggaataccatggcaagacatgctgacaattgtgctggtcca
gatggcgtagaaggggagaacggaggggaaacaaagaagagtaaacgtggcagaaaaaga
aagatgcgttccaaaaaagaagactcctccgacagtgaaaatgctgagccagacctggat
gacaatgaggatgaggaggaacctgctgtggaaattgaacccgagccagagcctcagcct
gtgaccccagccccaccacctgccaagaagcggagaggacgccctcctggcagaaccaac
cagcccaaacagacccagccaacagccatcatccaggtggaagaccagaatacaggtgca
attgagaacattatagttgaagtcaaaaaagagccagacgcggagcccgtggagggagag
gaagaggaggcccaaccagctgccacagacgcccccaacggagacctcacgcccgagatg
atcctcagcatgatggaccggtga |
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