Ursus maritimus (polar bear): 103675328
Help
Entry
103675328 CDS
T03271
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X2
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103675328 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
umr03021
]
103675328 (PCF11)
03019 Messenger RNA biogenesis [BR:
umr03019
]
103675328 (PCF11)
Transcription machinery [BR:
umr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103675328 (PCF11)
Messenger RNA biogenesis [BR:
umr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
103675328 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
CID
Pcf11_helical
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
Motif
Other DBs
NCBI-GeneID:
103675328
NCBI-ProteinID:
XP_008702594
UniProt:
A0A384D738
LinkDB
All DBs
Position
Unknown
AA seq
1555 aa
AA seq
DB search
MSEQTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLVSRGLI
QQETSNLGSGSVPSKLHVPQIPPMAVKPPHQVPVQPEKSRPGPSLQIQDLKGTNRDPRLN
RMSQHSSHGKDQSHRKEFLMNTLNQSDTKTSKTVPSEKLNSSKQEKSKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKLSHTKDLKNQESESARVSEMSKRDPRLKKHLQDKTDSKDDDV
KEKRKTAEKKDKDEHMKSSEHRLVGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGVKQSHMEEFTLPSR
EERNAKRSNKQDIRDPRRIKKTEEERPQEAANQHSTKSGTEPKENVENWQSSKSTKRWKS
GWEENKSLQQGDEHSKSPHLRHRESWSSTKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGVREEQRSPFNDRFPLKRPRYED
SDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVTRDGPTKMIFEGPNKLSPRI
DGPPTPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ
AGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVG
GLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPAGGIRFEGPLLQQGVGMRFEGPH
GQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRI
EGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQPGPQRFDGPPGQ
QVQPRFDGVPQRFDGPQHQQASRFDIPLGLQSTRFDNHPSQRLESVSFNQTGPYSDPPGN
AFNAPSQGLQFQRHEQMFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYFDEKNLQSSQFG
NFGNLPAPITVGNIQASQQVLTGVAQPVAFGQGQQFLPVHPQNPGAFVQNPSGALPKAYP
DNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEVAAQPPPEEEEDQTEDQDVPDLTN
FTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKVT
HRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQSVPAGPAGAV
ESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDCTPSPSKTPVE
NPLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATPTEIKTENDTVESV
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtactgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcactcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaacgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttcc
acatgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattcg
ttagatcctgcttggcctattaaacctctgccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaagagccttcaacacctggcacagtggtc
agttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacccaa
gaacaactaataaggcagcagttactggcaaaacaaaaacagttgttagaacttcagcag
aaaaagctggagcttgagctagagcaagctaaggcacaactggtaagtagaggacttatt
cagcaggagacatccaacttaggttctggatctgtaccatccaaattacatgttccacaa
attccccctatggcagttaaacctccccatcaggttcctgtgcaacctgagaaaagccgt
cctggtccatccttacaaattcaggatttgaaaggaactaatcgggatccccgtcttaat
aggatgagtcaacattcttcacatggaaaagatcagagtcacaggaaggaattcctaatg
aacacattgaaccaatctgatactaagacaagtaaaactgtaccctctgaaaaactaaac
tcatctaagcaagagaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccaa
ttagattctaaatctaaatctaaatctaaatcaccatcacctctgaaaaacaaattatcc
cacacaaaagacttgaaaaatcaggaatctgaaagtgcaagggtgtctgaaatgagcaag
agagatccaaggttaaaaaaacatcttcaggataagactgatagcaaagatgatgatgta
aaagagaagagaaaaactgcagaaaaaaaggataaagatgagcacatgaaatcatctgaa
cacagactggttggaagtagaaataaaatcatcaatggcattgtacaaaagcaggataca
ataacggaagaatcagaaaaacaagggacaaaaccagggagatcaagtactagaaagcga
tcaagatcgagatcacccaagtctcggtcaccaattatacattctccgaagagaagagat
aggcggtcacctaaacgaaggcaaaggagtatgtctccaacttcgacgcccaaagctgga
aagattcggcaatcaggagttaagcagtcacatatggaagagtttacgctaccttccagg
gaagagcgaaatgctaagagaagtaataaacaggatattcgagatccaaggcgaataaaa
aagactgaggaggaaagaccacaagaagctgcaaatcagcattctacaaagtcgggcact
gaaccaaaggagaatgtagaaaattggcaaagttccaagtctaccaaaagatggaaatct
ggttgggaagaaaataaaagcttacaacagggtgatgaacatagtaaatctcctcatcta
aggcatagggagagctggtcaagcactaaaggaatcttgtcacctcgagccccaaagcag
cagcatcgcttaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gagttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtgtacga
gaagagcagagatcaccattcaatgatcgttttccacttaagcgacctagatatgaagat
tcagataaaccatttgtagatagcccagcatcaagatttgccggccttgatacaaatcag
cgacttacagctttagctgaagatagaccattatttgatggacctagtaggccatcagta
acaagagatggcccaaccaagatgatttttgaaggacctaataaattaagccctagaatt
gatggacctcctacaccaggttctcttcggtttgatgggtcaccaggacaaatgggggga
ggtggccctttgagatttgaaggaccacaaggtcagctaggaggtgggtgtcctttgaga
tttgaaggtcctccaggaccagtagggacacctctgcggtttgaggggccgattggtcaa
gcaggaggaggtggttttcggtttgaaggttcccctggtctgaggtttgagggatctgca
ggtggtttgcgatttgaaggtccagggggccagcctgtgggtggtctcaggtttgaggga
catcggggtcaacctgtgggtggtctaaggtttgagggacctcatggtcagcctgtgggt
ggacttagatttgataatccccgaggtcaacctgttggtggacttagatttgaagggggt
catggtccatcaggggctgcaattaggtttgatggacctcatggtcagccagcaggtggg
atcagatttgagggccctttgctacagcagggagttggaatgaggtttgagggcccccat
ggtcagtcagtagccggtttaaggtttgaaggacaacataatcaacttggtgggaacctt
aggtttgagggtccacatggtcagccaggggttgggatcaggtttgaaggaccgttagtc
caacaaggaggtggaatgaggtttgagggtccttctgtgccaggaggtggcctgagaatt
gaagggcctctgggtcaaggtggtccaaggtttgaaggttgtcatgctttaaggtttgat
gggcagccaggtcagccatcactcttgccaagatttgatggattacatgggcagccaggt
cctagatttgaaagaactggtcagccaggcccacagagatttgatggaccacctggacag
caggttcaaccaagatttgatggtgtacctcaaagatttgatggtccacaacaccagcaa
gcatcaaggtttgatattcctcttggtcttcaaagcacacgatttgacaatcatccttca
cagaggcttgaatcagtgtctttcaatcagactggtccatatagtgatccacctggcaat
gcttttaatgccccatcccaaggactacagttccaaagacatgaacaaatgtttgattca
cctcaaggaccaaattttaatggaccacatggccctggaaaccagagcttctccaatccc
cttaacagagcttctggacactattttgatgaaaagaatcttcagagttcccaatttgga
aactttggcaatttacctgctccaataacagtaggaaatattcaggcatctcaacaggtt
cttactggtgttgctcagccggtagcatttggccaaggacaacagtttttgccggttcat
ccacaaaatcctggagcatttgttcagaatccttcaggagctcttcctaaggcatatcct
gataatcatctcagtcaggtggatgtaaatgaattattttcaaaactgctaaaaacagga
attctcaaattgtctcagcctgattcagctacaactcaagtaaatgaagttgctgctcag
cctccccctgaagaggaggaagatcaaactgaagatcaggatgttccagatcttaccaat
tttacaattgaagaattgaaacaacgttatgatagtgttataaatcgactgtacactggt
attcagtgttactcctgtggaatgaggtttacaacatcacagacagatgtatacgcagat
cacttggactggcattatcggcaaaatagaactgaaaaagatgttagcagaaaagtcacg
catagacgttggtactacagtttaacagactggatagaatttgaggaaatagctgatttg
gaagaacgtgcaaagagccagttttttgaaaaggtgcatgaagaagttgtgctcaagact
caggaggctgctaaagaaaaggagttccaaagtgtacctgctggaccagctggagcagtt
gagagttgtgaaatctgtcaagaacaatttgaacaatactgggatgaagaagaggaggaa
tggcatttgaaaaatgctattagagtagatggaaagatttatcatccatcatgttacgaa
gattatcaaaatacatcttcatttgattgtacaccatctcccagcaagacaccggttgaa
aaccctttgaacattatgttgaacattgtcaaaaacgaattgcaggaaccctgtgaaagt
cccaaagttaaggaagaacgaattgataccccaccagcttgtacagaggaaagcatagca
acacccactgaaattaaaacagaaaatgatacagtcgagtcagtttaa
DBGET
integrated database retrieval system
