Entry |
|
Symbol |
CDC40
|
Name |
(RefSeq) pre-mRNA-processing factor 17
|
KO |
K12816 | pre-mRNA-processing factor 17 |
|
Organism |
umr Ursus maritimus (polar bear)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:umr00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103677002 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:umr03041]
103677002 (CDC40)
Spliceosome [BR:umr03041]
Complex C
Other components
Step II factors
103677002 (CDC40)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
579 aa
MSAAIAALAASYGSGSGSESDSDSEGGRCSLPAADSLMHLTKSASTKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCVSRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD |
NT seq |
1740 nt +upstreamnt +downstreamnt
atgtcggctgcgattgcagctctggctgcgtcctacggttcgggttcagggtccgaatcg
gactcggacagtgagggcggacggtgttccctgccagccgccgactccctcatgcacttg
acgaaatcagcttcgaccaagccctctctggcagtggcggtggactcggctccggaggtg
gcagttaaggaagatttggagactggagttcaccttgaccctgctgtcaaagaggttcag
tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcaaatggctgcccctcgaaatatgctttctggatatgctgaaccagctcatatc
aatgattttatgtttgaacagcaaagaagaacttttgccacatacggttatgcattagac
ccttcattagataatcatcaagtgtctactaaatatattggttcagtagaagaagctgaa
aaaaatcaaggtttaaccgtgtttgaaactggtcagaaaaaaatagaaaagaggaaaaag
ttcaaagaaaatgacgcatctaatattgatggttttttgggaccgtgggcaaaatatgtg
gatgaaaaagatgtagccaaaccctcagaagaagaacaaaaagaattggatgaaatcaca
gcaaagaggcagaaaaagggcaaacaggaagaagagaaacctggggaggagaagacaatc
ttacatgttaaagaaatgtatgactaccaaggtagatcctatcttcacatacctcaggat
gttggtgttaatctgcggtccactgtgccacctgagaagtgctacctccccaaaaaacaa
attcatgtgtggtcgggacatacaaagggcgtcagtgccgtcagattattccctctctct
ggccatttattgctgtcttgttccatggactgtaaaattaagctatgggaggtttacgga
gacagacgctgcctgcgaacatttattggccacagcaaagccgttagggacatctgcttt
aatactgcaggaacacagttcctcagcgcagcctatgacaggtaccttaagctctgggac
actgagacaggacagtgtgtatcaagatttacaaaccgaaaagtgccctattgtgtcaaa
tttaatcccgatgaagataagcaaaatctctttgtagctggtatgtcggataaaaagatt
gtgcagtgggacattcgaagtggagaaattgtgcaggagtatgaccggcatttgggagct
gtcaacaccattgtttttgttgatgagaataggagattcgtgagcacatctgatgataag
agcctacgagtttgggaatgggatatccctgtggatttcaagtacatagcagagcccagt
atgcactcgatgcctgcagtgactttgtcgccaaatgggaaatggctagcatgccaatca
atggacaaccaaatcttaatttttggagcacagaacagatttagattgaataagaaaaaa
atttttaagggccatatggtagcgggttacgcttgtcaggtggacttttcaccagacatg
agctacgtgatttcaggagatggaaatggaaaattgaatatctgggactggaagaccacc
aaactctacagtcgatttaaagctcacgataaagtgtgtataggagcagtgtggcatcct
catgaaacatctaaagtcataacatgcggttgggatggtctcattaaattgtgggattaa |