Ursus maritimus (polar bear): 103677002
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Entry
103677002 CDS
T03271
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103677002 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
umr03041
]
103677002 (CDC40)
Spliceosome [BR:
umr03041
]
Complex C
Other components
Step II factors
103677002 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
103677002
NCBI-ProteinID:
XP_008704445
UniProt:
A0A384DCD4
A0A452VNN3
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MSAAIAALAASYGSGSGSESDSDSEGGRCSLPAADSLMHLTKSASTKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCVSRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcgattgcagctctggctgcgtcctacggttcgggttcagggtccgaatcg
gactcggacagtgagggcggacggtgttccctgccagccgccgactccctcatgcacttg
acgaaatcagcttcgaccaagccctctctggcagtggcggtggactcggctccggaggtg
gcagttaaggaagatttggagactggagttcaccttgaccctgctgtcaaagaggttcag
tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcaaatggctgcccctcgaaatatgctttctggatatgctgaaccagctcatatc
aatgattttatgtttgaacagcaaagaagaacttttgccacatacggttatgcattagac
ccttcattagataatcatcaagtgtctactaaatatattggttcagtagaagaagctgaa
aaaaatcaaggtttaaccgtgtttgaaactggtcagaaaaaaatagaaaagaggaaaaag
ttcaaagaaaatgacgcatctaatattgatggttttttgggaccgtgggcaaaatatgtg
gatgaaaaagatgtagccaaaccctcagaagaagaacaaaaagaattggatgaaatcaca
gcaaagaggcagaaaaagggcaaacaggaagaagagaaacctggggaggagaagacaatc
ttacatgttaaagaaatgtatgactaccaaggtagatcctatcttcacatacctcaggat
gttggtgttaatctgcggtccactgtgccacctgagaagtgctacctccccaaaaaacaa
attcatgtgtggtcgggacatacaaagggcgtcagtgccgtcagattattccctctctct
ggccatttattgctgtcttgttccatggactgtaaaattaagctatgggaggtttacgga
gacagacgctgcctgcgaacatttattggccacagcaaagccgttagggacatctgcttt
aatactgcaggaacacagttcctcagcgcagcctatgacaggtaccttaagctctgggac
actgagacaggacagtgtgtatcaagatttacaaaccgaaaagtgccctattgtgtcaaa
tttaatcccgatgaagataagcaaaatctctttgtagctggtatgtcggataaaaagatt
gtgcagtgggacattcgaagtggagaaattgtgcaggagtatgaccggcatttgggagct
gtcaacaccattgtttttgttgatgagaataggagattcgtgagcacatctgatgataag
agcctacgagtttgggaatgggatatccctgtggatttcaagtacatagcagagcccagt
atgcactcgatgcctgcagtgactttgtcgccaaatgggaaatggctagcatgccaatca
atggacaaccaaatcttaatttttggagcacagaacagatttagattgaataagaaaaaa
atttttaagggccatatggtagcgggttacgcttgtcaggtggacttttcaccagacatg
agctacgtgatttcaggagatggaaatggaaaattgaatatctgggactggaagaccacc
aaactctacagtcgatttaaagctcacgataaagtgtgtataggagcagtgtggcatcct
catgaaacatctaaagtcataacatgcggttgggatggtctcattaaattgtgggattaa
DBGET
integrated database retrieval system