KEGG   Ursus maritimus (polar bear): 103677002
Entry
103677002         CDS       T03271                                 
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
umr  Ursus maritimus (polar bear)
Pathway
umr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:umr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103677002 (CDC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:umr03041]
    103677002 (CDC40)
Spliceosome [BR:umr03041]
 Complex C
  Other components
   Step II factors
    103677002 (CDC40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 WDR54 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 103677002
NCBI-ProteinID: XP_008704445
UniProt: A0A452VNN3 A0A384DCD4
LinkDB
Position
Unknown
AA seq 579 aa
MSAAIAALAASYGSGSGSESDSDSEGGRCSLPAADSLMHLTKSASTKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCVSRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgtcggctgcgattgcagctctggctgcgtcctacggttcgggttcagggtccgaatcg
gactcggacagtgagggcggacggtgttccctgccagccgccgactccctcatgcacttg
acgaaatcagcttcgaccaagccctctctggcagtggcggtggactcggctccggaggtg
gcagttaaggaagatttggagactggagttcaccttgaccctgctgtcaaagaggttcag
tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcaaatggctgcccctcgaaatatgctttctggatatgctgaaccagctcatatc
aatgattttatgtttgaacagcaaagaagaacttttgccacatacggttatgcattagac
ccttcattagataatcatcaagtgtctactaaatatattggttcagtagaagaagctgaa
aaaaatcaaggtttaaccgtgtttgaaactggtcagaaaaaaatagaaaagaggaaaaag
ttcaaagaaaatgacgcatctaatattgatggttttttgggaccgtgggcaaaatatgtg
gatgaaaaagatgtagccaaaccctcagaagaagaacaaaaagaattggatgaaatcaca
gcaaagaggcagaaaaagggcaaacaggaagaagagaaacctggggaggagaagacaatc
ttacatgttaaagaaatgtatgactaccaaggtagatcctatcttcacatacctcaggat
gttggtgttaatctgcggtccactgtgccacctgagaagtgctacctccccaaaaaacaa
attcatgtgtggtcgggacatacaaagggcgtcagtgccgtcagattattccctctctct
ggccatttattgctgtcttgttccatggactgtaaaattaagctatgggaggtttacgga
gacagacgctgcctgcgaacatttattggccacagcaaagccgttagggacatctgcttt
aatactgcaggaacacagttcctcagcgcagcctatgacaggtaccttaagctctgggac
actgagacaggacagtgtgtatcaagatttacaaaccgaaaagtgccctattgtgtcaaa
tttaatcccgatgaagataagcaaaatctctttgtagctggtatgtcggataaaaagatt
gtgcagtgggacattcgaagtggagaaattgtgcaggagtatgaccggcatttgggagct
gtcaacaccattgtttttgttgatgagaataggagattcgtgagcacatctgatgataag
agcctacgagtttgggaatgggatatccctgtggatttcaagtacatagcagagcccagt
atgcactcgatgcctgcagtgactttgtcgccaaatgggaaatggctagcatgccaatca
atggacaaccaaatcttaatttttggagcacagaacagatttagattgaataagaaaaaa
atttttaagggccatatggtagcgggttacgcttgtcaggtggacttttcaccagacatg
agctacgtgatttcaggagatggaaatggaaaattgaatatctgggactggaagaccacc
aaactctacagtcgatttaaagctcacgataaagtgtgtataggagcagtgtggcatcct
catgaaacatctaaagtcataacatgcggttgggatggtctcattaaattgtgggattaa

DBGET integrated database retrieval system