Ursus maritimus (polar bear): 103677852
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Entry
103677852 CDS
T03271
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03008
Ribosome biogenesis in eukaryotes
umr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103677852 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
103677852 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
umr03021
]
103677852 (XRN2)
03019 Messenger RNA biogenesis [BR:
umr03019
]
103677852 (XRN2)
03009 Ribosome biogenesis [BR:
umr03009
]
103677852 (XRN2)
03016 Transfer RNA biogenesis [BR:
umr03016
]
103677852 (XRN2)
Transcription machinery [BR:
umr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103677852 (XRN2)
Messenger RNA biogenesis [BR:
umr03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
103677852 (XRN2)
Ribosome biogenesis [BR:
umr03009
]
Eukaryotic type
Pre-60S particles
RNases
103677852 (XRN2)
Transfer RNA biogenesis [BR:
umr03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
103677852 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
103677852
NCBI-ProteinID:
XP_040493831
UniProt:
A0A384DE85
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MFCSLVACAQEQQPPARSMGSNNGLEAQKSCPICLEVYQQPVAGHPQLWPCPKECNGVKI
PVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRP
RRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKER
FDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRR
QRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVK
DCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDD
WVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIML
AVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFSLGGILTPHALGSRNSPGSQVA
SNPRQAAYEMRMQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEA
GWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASD
FEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFA
IDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDILFVGKHHPLHD
FILELYQTGSTEPVDVPPELCHGIQGKFSLDEEAVLPDRIVCSPVPMLRDLTQNTAISIN
FKDPQFAEDYIFKAVMLPGARKPAPVLKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAA
FRTLGHVMPRGSGAGVYGNPAPPPATYQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPP
LFQQQRFDRGVGAEPLLPWNRMLQTQNAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPRE
GRKYPLPPPSGRYSWN
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgttctgcagcctggtggcctgcgctcaggagcagcaaccaccagccaggtctatgggc
agcaacaatggtctggaagctcagaaaagctgccccatctgcctggaggtgtaccagcag
cctgtggccggccatccacagctgtggccatgtccaaaagaatgcaatggtgtaaagatt
cctgttgatgccagtaaaccaaatccaaatgatgtggagtttgataatctgtatttggat
atgaatggaatcatccatccctgtactcatcctgaagacaaaccagcaccaaaaaatgag
gatgaaatgatggttgcaatttttgagtacattgacagacttttcaatattgtaagacca
agacgacttctctacatggcaatagatggagtggcaccacgtgctaaaatgaaccagcag
cgttccagaaggttcagagcatcaaaagaaggaatggaagcagcagtggagaagcagcga
gtcagggaagaaatactggccaaaggtggctttcttcctccagaagaaataaaagaaaga
ttcgacagcaactgtattacaccaggaaccgagttcatggacaatcttgctaaatgcctt
cgctattacatagctgatcgtttaaataatgaccctgggtggaaaaacttgacagttatt
ttatctgatgctagtgctcctggtgagggagaacataaaatcatggattatattagaaga
caaagagcccaacctaaccatgacccaaacactcatcattgcttatgtggagcagatgct
gacctcattatgctcggccttgctacacatgaacccaactttaccatcattagagaagaa
ttcaaaccaaacaaacctaaaccatgtggactttgtaatcagtttggacatgaggtcaag
gactgtgaaggtttgccaagagaaaagaagggaaagcatgatgaacttgcagatagtctt
ccttgtgcagaaggagaatttatcttccttcgtcttaatgttcttcgtgagtatttggaa
agagagctcaccatggccagcctgccgtttacatttgatgtcgagaggagtattgatgac
tgggtcttcatgtgcttctttgtgggaaatgacttccttcctcacctgccatcattagaa
attagggaaggtgcaattgatcgtttggttaacatatacaaaaatgtggtacacaaaact
gggggttaccttacagaaagtggttatgtcaatctgcaaagagtacagatgatcatgtta
gcagttggtgaagttgaggatagcatttttaaaaagagaaaggatgatgaggacagtttt
agaagacgacagaaagaaaaaagaaagagaatgaagagagatcaaccagctttctctctt
ggtggaatactaaccccgcatgccttgggttcaagaaattcaccaggttctcaagtagcc
agtaatccgagacaagcagcctatgaaatgaggatgcagaataactctagtccttcagta
tctcctaatacgagtttcacttctgatggctccccatctccaataggaggaattaagcga
aaagcagaagacagtgacagtgaacctgagccagaggataacgtcaggctatgggaagct
ggttggaagcagcggtactacaagaacaaatttgacgttgatgcagctgatgagaaattc
cgtcgtaaagttgtacagtcttatgttgaggggctctgctgggttcttcgatattattac
cagggctgtgcttcctggaagtggtattatccattccattatgcaccatttgcttcagac
tttgaaggtattgcagacatgccatctgattttgagaagggcactaaaccatttaaacca
ttggaacaactaatgggagtttttccagctgcgagtggtaattttctacctccatcatgg
cggaagctcatgagtgatcccgattctagtataattgacttctatcctgaagattttgct
attgatttgaatgggaagaaatatgcatggcaaggtgttgctctgttgccttttgtggat
gagcgaaggctgcgagctgctctagaagaggtatatccagacctcactccagaagagact
aaaagaaacagtcttggaggtgacatcttatttgtggggaaacatcacccactccatgac
ttcattttagaactctaccagacaggttccacagagccggtggatgtaccgcctgaatta
tgtcatgggattcaaggaaaattttctttggatgaagaagctgttcttccagatcgaata
gtatgttctcctgtccccatgttacgggatctgacacagaacactgcaatcagtattaat
tttaaagacccacagtttgctgaagactacatttttaaagctgtaatgcttccaggagca
agaaaaccagcaccagtactgaaacctagtgactgggaaaagtccagcaatgggcggcag
tggaagccccagcttggctttaatcgggaccggcggcctgtccacctggatcaggctgca
ttcaggactttgggccatgttatgccaagaggctcgggggctggcgtttacggcaaccct
gcaccaccacctgcaacgtatcaggggaacttatataggccgctgttgagaggacaagcc
cagattccaaaacttatgtcaaatatgaggccacaggattcttggcggggtcctcctccc
ctcttccagcagcaaagatttgacagaggcgttggggctgaacctctgctgccatggaac
cggatgctccaaacccagaatgcagccttccagccaaaccagtaccagatgctagctgga
cctggcgggtatccacccagacgtgatgatcgtggagggagacagggatatcccagagaa
ggaaggaaataccctttgccaccaccctcaggaagatacagttggaattag
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