Ursus maritimus (polar bear): 103678204
Help
Entry
103678204 CDS
T03271
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03008
Ribosome biogenesis in eukaryotes
umr03013
Nucleocytoplasmic transport
umr03015
mRNA surveillance pathway
umr05014
Amyotrophic lateral sclerosis
umr05164
Influenza A
umr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103678204 (NXF1)
03015 mRNA surveillance pathway
103678204 (NXF1)
03008 Ribosome biogenesis in eukaryotes
103678204 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103678204 (NXF1)
05168 Herpes simplex virus 1 infection
103678204 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103678204 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
umr03019
]
103678204 (NXF1)
03009 Ribosome biogenesis [BR:
umr03009
]
103678204 (NXF1)
Messenger RNA biogenesis [BR:
umr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103678204 (NXF1)
mRNA cycle factors
Stress granule specific factors
103678204 (NXF1)
Ribosome biogenesis [BR:
umr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
103678204 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
UBA_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
103678204
NCBI-ProteinID:
XP_040495191
UniProt:
A0A8M1GHP5
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDRDVAM
SDAQDVPRIRHNPYPSRPNRRGDSWHDRDRIHVTVRRDRTLPDRGGAGTSQDGTSRNWFK
ITIPYGRKYDKSWLLSVIQSKCNVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILD
QENRRISIIINSSAPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQ
NIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSLVQKAPNLKILNLSGN
ELKSERELDKVKGLKLEELWLDGNPLCDTFRDQSTYISAVRERFPKLLRLDGHELPPPIA
FDVEAPTMLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLSIP
FTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFVV
DISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNASP
DEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQ
AFTHLKAKGEIPEVAFMK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggaagtcctacaacgagcacgatgaccgcgttagtttccctcaaaga
agaaagaaaggccggggtcctttccggtggaagtatggtgaggggaaccgtaggtctgga
agaggaggttctggcattcggtcttcccgcttggaggaagatgacagagatgtggcaatg
agtgatgcccaggatgttccccgaatacgacataacccctatccttcccgacccaaccgt
cgaggtgacagttggcacgatcgagatcgcattcatgttactgtgcggagagacagaact
cttccagacagaggaggggctggcaccagccaggatgggacctccaggaactggtttaag
attacaattccctatggcagaaaatatgacaagtcatggctcctgagtgtgattcagagc
aagtgcaacgtccctttcacccccattgagtttcactatgaaaacacacgggcccagttt
tttgttgaggatgccagtaccgcgtctgcattgaaggccgtcaactataagattttggat
caggaaaaccgaaggatatcgatcatcatcaactcctctgccccaccgcattcggtacag
aacgaactgaagcctgagcaagtagagcagctaaagctgatcatgagcaaacgatatgat
ggctcccaacaagcgcttgacctcaagggcctccgttcagacccagacttggtggcccag
aacatcgacgtcgtcctgaatcgcaggagctgtatggcggctaccctgcgaatcattgag
gagaacatccctgagcttttgtccttaaacttgagcaacaacaggctatacaggctggat
gacatgtccagccttgtgcagaaagcacccaacctgaagatcctcaacctctctggaaat
gagttaaagtctgagagggaattggacaaggtaaaagggctgaagctggaagagttgtgg
ctcgacggaaacccgctgtgcgacaccttccgagaccagtccacctacatcagcgccgtt
cgagaacgatttcccaaattgttacgcctggacggccacgagttacccccgccgattgcc
tttgatgttgaagcccccacgatgttaccgccctgcaagggaagctattttggaacagag
accctgaagaatctggtcctgcacttcctgcagcagtactatgcggtgtatgactctgga
gaccggcagcggctcctggacgcctaccacgacggggcctgctgctccctcagcattcct
ttcacccctcagaaccctgcccgaagcaacctggccgagtacttcaaagatagcaggaat
gtgaagaagctcaaagacccgaccctgcggttccggctgctgaagcacacgcgtctcaat
gtcgtggccttcctcaatgagctacccaaaacccagcacgacatcaattcctttgtggtg
gacataagcgcccagacaagtacattgctgtgtttttctgtcaacggggtcttcaaagaa
gtggacggaaagtctcgggattctttgcgagccttcacccggacatttgtcgcagttcct
gccagcaattcagggctgtgcatcgtaaacgacgagctgtttgtgcggaacgccagccct
gacgagatccagagagccttcgccatgcctgcacccacgccttcctccagcccagtgccc
accctgtccccagagcagcaggaaatgctgcaggcgttctctacccagtctggcatgaac
cttgagtggtcccagaagtgccttcaggacaacaactgggactacaccagatctgcccag
gcctttactcatctcaaggccaagggcgagatcccagaagtggcatttatgaagtga
DBGET
integrated database retrieval system