KEGG   Ursus maritimus (polar bear): 103678204
Entry
103678204         CDS       T03271                                 
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
umr  Ursus maritimus (polar bear)
Pathway
umr03008  Ribosome biogenesis in eukaryotes
umr03013  Nucleocytoplasmic transport
umr03015  mRNA surveillance pathway
umr05014  Amyotrophic lateral sclerosis
umr05164  Influenza A
umr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:umr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103678204 (NXF1)
   03015 mRNA surveillance pathway
    103678204 (NXF1)
   03008 Ribosome biogenesis in eukaryotes
    103678204 (NXF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    103678204 (NXF1)
   05168 Herpes simplex virus 1 infection
    103678204 (NXF1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    103678204 (NXF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:umr03019]
    103678204 (NXF1)
   03009 Ribosome biogenesis [BR:umr03009]
    103678204 (NXF1)
Messenger RNA biogenesis [BR:umr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103678204 (NXF1)
   mRNA cycle factors
    Stress granule specific factors
     103678204 (NXF1)
Ribosome biogenesis [BR:umr03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    103678204 (NXF1)
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 LRR_4 LRR_8 UBA_8 LRR_9
Other DBs
NCBI-GeneID: 103678204
NCBI-ProteinID: XP_040495191
UniProt: A0A8M1GHP5
LinkDB
Position
Unknown
AA seq 618 aa
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDRDVAM
SDAQDVPRIRHNPYPSRPNRRGDSWHDRDRIHVTVRRDRTLPDRGGAGTSQDGTSRNWFK
ITIPYGRKYDKSWLLSVIQSKCNVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILD
QENRRISIIINSSAPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQ
NIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSLVQKAPNLKILNLSGN
ELKSERELDKVKGLKLEELWLDGNPLCDTFRDQSTYISAVRERFPKLLRLDGHELPPPIA
FDVEAPTMLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLSIP
FTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFVV
DISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNASP
DEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQ
AFTHLKAKGEIPEVAFMK
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggcggacgaggggaagtcctacaacgagcacgatgaccgcgttagtttccctcaaaga
agaaagaaaggccggggtcctttccggtggaagtatggtgaggggaaccgtaggtctgga
agaggaggttctggcattcggtcttcccgcttggaggaagatgacagagatgtggcaatg
agtgatgcccaggatgttccccgaatacgacataacccctatccttcccgacccaaccgt
cgaggtgacagttggcacgatcgagatcgcattcatgttactgtgcggagagacagaact
cttccagacagaggaggggctggcaccagccaggatgggacctccaggaactggtttaag
attacaattccctatggcagaaaatatgacaagtcatggctcctgagtgtgattcagagc
aagtgcaacgtccctttcacccccattgagtttcactatgaaaacacacgggcccagttt
tttgttgaggatgccagtaccgcgtctgcattgaaggccgtcaactataagattttggat
caggaaaaccgaaggatatcgatcatcatcaactcctctgccccaccgcattcggtacag
aacgaactgaagcctgagcaagtagagcagctaaagctgatcatgagcaaacgatatgat
ggctcccaacaagcgcttgacctcaagggcctccgttcagacccagacttggtggcccag
aacatcgacgtcgtcctgaatcgcaggagctgtatggcggctaccctgcgaatcattgag
gagaacatccctgagcttttgtccttaaacttgagcaacaacaggctatacaggctggat
gacatgtccagccttgtgcagaaagcacccaacctgaagatcctcaacctctctggaaat
gagttaaagtctgagagggaattggacaaggtaaaagggctgaagctggaagagttgtgg
ctcgacggaaacccgctgtgcgacaccttccgagaccagtccacctacatcagcgccgtt
cgagaacgatttcccaaattgttacgcctggacggccacgagttacccccgccgattgcc
tttgatgttgaagcccccacgatgttaccgccctgcaagggaagctattttggaacagag
accctgaagaatctggtcctgcacttcctgcagcagtactatgcggtgtatgactctgga
gaccggcagcggctcctggacgcctaccacgacggggcctgctgctccctcagcattcct
ttcacccctcagaaccctgcccgaagcaacctggccgagtacttcaaagatagcaggaat
gtgaagaagctcaaagacccgaccctgcggttccggctgctgaagcacacgcgtctcaat
gtcgtggccttcctcaatgagctacccaaaacccagcacgacatcaattcctttgtggtg
gacataagcgcccagacaagtacattgctgtgtttttctgtcaacggggtcttcaaagaa
gtggacggaaagtctcgggattctttgcgagccttcacccggacatttgtcgcagttcct
gccagcaattcagggctgtgcatcgtaaacgacgagctgtttgtgcggaacgccagccct
gacgagatccagagagccttcgccatgcctgcacccacgccttcctccagcccagtgccc
accctgtccccagagcagcaggaaatgctgcaggcgttctctacccagtctggcatgaac
cttgagtggtcccagaagtgccttcaggacaacaactgggactacaccagatctgcccag
gcctttactcatctcaaggccaagggcgagatcccagaagtggcatttatgaagtga

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