Ursus maritimus (polar bear): 103679288
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Entry
103679288 CDS
T03271
Symbol
COL6A5
Name
(RefSeq) collagen alpha-5(VI) chain
KO
K06238
collagen type VI alpha
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr04151
PI3K-Akt signaling pathway
umr04510
Focal adhesion
umr04512
ECM-receptor interaction
umr04820
Cytoskeleton in muscle cells
umr04974
Protein digestion and absorption
umr05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103679288 (COL6A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103679288 (COL6A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103679288 (COL6A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103679288 (COL6A5)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103679288 (COL6A5)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103679288 (COL6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
umr04147
]
103679288 (COL6A5)
00536 Glycosaminoglycan binding proteins [BR:
umr00536
]
103679288 (COL6A5)
Exosome [BR:
umr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103679288 (COL6A5)
Glycosaminoglycan binding proteins [BR:
umr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103679288 (COL6A5)
Hyaluronan
Extracellular matrix or blood plasma proteins
103679288 (COL6A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
103679288
NCBI-ProteinID:
XP_008707028
UniProt:
A0A384DJ23
LinkDB
All DBs
Position
Unknown
AA seq
2610 aa
AA seq
DB search
MKSLLIIFILTLWTETLADQSPEPGPEYADVVFLVDSSDHLGTKSFPLVKAFIHKTVSGL
PVDAHKYRVALAQYSDRLHSEFQLATFKSRNPMLNHLKKNFGFLGGSLRTGHALREAHRT
FFSAPAGGRDKKQFPPILVVLASAQSEDDVEEASKALREDGVRIVSVGLQSASEEELKAM
ATSRFHFNLRSARDLGAFSQNMTQIIKEATQYRDGAAPHSVGVPFPVACQKDSLADLIFL
VDESVGTKQNLRNLQNFLRNIAASMDVRYNCTRLGLMSYSDRTNTISLLNSSTTQYEFQE
QIQKLSVQAGKSNAGAAIEKMRLEAFSESSGSRRAQGVPQIAVLVTHRPSTDEVRDVAIQ
LRLQDVTVFGMNIQGADETQLEEIASYPPRQMVSMLKSYADLETYSKNFQKKLRNEIWSQ
ISTRAEQMDLDRTGCIDTKEADIYFLIDGSTSIQGKHFEQIKEFMLAVTGMFSIGPDKVQ
VGAVQYSHKMRVEFYINDNSNNVNLKNAILNIEQLQGNTYTGEALNFTLSIIKEDRKHRT
SQVPCYLIVLTDGRSADDVLEPAERLRAEQVTIHAVGIGEANKVQLQQIAGGEERVSFGQ
NFDSLRSIKNEVVHRICTEKGCEDMKADIMFLVDSSGSIGHENFGKMKTFMKSLLAKIQI
GPDRTHIGVIQFSDKTREEFQLNKYFTQNEISDAIDRMSLIDKNTLTGNALISVDQYFTP
ARGARIGVKKFLILITDGEAQDAVRDPAKALRDKGVVIFSVGVYGANRTQLEEISGDGNL
VFQVENFDDLKTIESKLIFRVCALHDCKNIKVLDIVFVLDHSGSINTQEQENMMALTIHL
VKKADVGSDRVRIGALKYSDYPEILFHLGKYSNRSSVIEHLRRRRDTGGNTYTARALDHT
NIMFTEEYGSRIQQNVKQMLIVITDGASHDRTLLNETALKLRNRGIDIYAVGVGPADQLE
LEAMAGNKSKTFHVDNFNKLEDIYLPLQESMCINAHEWCDIQEADVVFFCDGSDMVSNSE
FVTMTTFVSELIDHFNIQNQKIKIGLAQFGSGFQKIIELKNSLTIPELKTQIQSIPKSKG
FPRMDLALKKVKAMFDPSSGGRRNAGVPQTLVVITSGDPYYDVADEVKILRNLGICVLVW
GIGNIHKEQLLPITGHSEKIVTLQDFNKLMNVDVKKRMVREICQSCGKTNCFMDIVVGFD
ISTHLRGQPLFHGHPRLRSYLPGILEDISSIGRVSCGAGSDVQVNVAFKVNNDREFPAKF
QIYQKAIFDSLLQVTVNGPSHLNAQFLQSLWDTFKDQSKSQGQVLLIFSDGLGGESEIML
ENQSDRLREAGLDALLVVSLNTTAHDEFSSFEFGKGFDYMTHLTIGMRELGKMLSQYLGN
VAEKTCCCTLCKCSGTPGPYGSRGLQAAKGSRGLKGSRGHRGEDGDPGRRGDIGPLGDKG
IAGCPGEQGQKGAKGFSGSKGEQGEDGIDGLDGEEGFHGPSGEKGEKGDPGSQGSPGSRG
PPGGYGEKGFPGDPGNPGQNSNIKGQKGSKGEQGRQGRTGQKGTPGNPNSRGNRGREGQR
GPPGASGEPGNRGPEGTQGADGLQGPQGLNGIPGRKGEKGGEGHKGPQGSSGPVGAKGNV
GSPGPSGKKGEPGILGDPGPMGQAGQRGRQGDYGIPGYGPMGRKGIKGPRGFPGDMGQKG
AVGDPGIPGGPGPKGFRGLTRTVGLKGEEGPPGPPGPPGRRGMKGMAGKPVYSQCDLIQF
MRDHSPCWKGTCPVYPTELVFALDQSYGISEQRFNEMREIVTSIVNDLNIKESNCPVGAR
VVVVSYDSGTSYLIRRSDYRNKKQLLQLISQIKYRPPTEARDVGNAMRFVARNVFKRTYA
GANVRKVAVFFSNGQAASRSSIITATMEFSALDISPAVFALNERIFLEAFEFDNTGTFQV
IPVSPNGEYEPLEKFQHCTLCYDKCFPNECIKEIFLPEDAYMDVAFLLDNSQTIANEEFK
AVKTLVSSMIDNFKIASDPGISNFGDRIALLSYSPWDRSRKKKGVVKTEFGFTTFNDRVL
MKRHIQSSLRQLEGETTIGHTLLWVVENLFPQTPNLRKHKVLFVISAGEYHERKEFLKKV
ALRAKCQGYVIVVISLGSTYKEDMEELASYPLDHHLIQLGRIHKPDLDYITKFIRPFVYS
VRRGFNEYPPPVLENDCRLISRGEAYQNSDPLLTPEPHEISSGENSFIGQELSAGKDSSF
LWEDNGSAHLVYVPSRVLTPQELTITYAQDWDSEEIASLTSGHENHGRKEEPGLTNEPGD
TSLQEYYMDVAFLIDASQRIGNDEFKEVKAFLISVLDYFHIAPDPLTSMLGDRVAVLSYS
PPGYMPNSEECPVYLEFDLVTYNSIHQMKHHLQDSFQQLNGDVFIGHALQWTIENVFVGT
PNLRKNKVIFVISAGETNPLDKEVLRNVALRAKCQGYSIFVFSFGPIHNDKELEELASHP
LDHHLVQLGRTHKPDLNYITKFVKPFVHLIRRAINKYPPADLRPKCVNITSPNPENVGSG
NNVFLIPEVYKIETGNSELFDEFGSQEQHSLVLGNNPSNGSETTTDLIQKLYMLFSTGEL
VMNDKEETHSEEMPALADGKLDKKDGEDSR
NT seq
7833 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcctgctaattattttcatcttaaccctttggactgaaacactggcagatcag
agtccagagccgggccctgagtatgcggatgtcgtgttcctggtggacagctccgaccac
ctgggaactaagtccttccccctcgtgaaagcgttcattcacaaaacggtcagcggtctg
cccgtagacgcccacaagtaccgcgtggccctggcgcagtacagcgaccggctccacagc
gagttccagctggccacgttcaagagcaggaaccccatgctgaaccacctcaagaagaac
ttcggcttccttggcggctccctgcggaccggccatgctctccgggaggcgcacaggacc
ttcttctctgcgccggccggcgggagggacaagaagcagtttcccccgattctggtggtc
ctggcctcggcccagtccgaggatgacgtggaagaggcctccaaggccctgcgggaagac
ggggtgagaatcgtctccgtggggctgcagagtgcttctgaggaggagctgaaggccatg
gccacctctcggtttcatttcaacctccggtcggccagggaccttggcgcgttttcccaa
aacatgacgcagatcatcaaggaggccacccagtacagggacggagcggcccctcacagt
gtaggcgttcccttcccagtggcctgtcagaaagattcattagctgacctcatattccta
gtggatgagtcagttggcacaaaacaaaatttaaggaacctgcagaatttcctgaggaac
attgccgcctccatggacgtgaggtacaactgcacacgccttggacttatgagttacagt
gatagaacaaacactatttcccttctaaattcaagcacaacccagtatgaatttcaggag
caaatccagaagctttctgtccaggctgggaaatccaatgctggggctgccattgagaag
atgaggctagaagccttctcagagtcaagtggcagcagaagggcacagggagtgcctcag
atcgcagtcttggtcactcacagaccatcgaccgatgaggtgcgtgatgtcgcaatacaa
cttcggctgcaggatgtgactgtgttcggcatgaacatccaaggggctgacgaaacccag
ttagaagaaatagcatcttaccctccgagacaaatggtttccatgctcaaatcctatgca
gacttggaaacttacagtaaaaacttccagaaaaagctccggaatgaaatttggtcccaa
atttctactcgtgctgagcaaatggaccttgacagaactggctgtatagatacaaaagag
gctgatatctatttcctcattgatggctcaaccagcatacagggaaaacacttcgagcaa
atcaaggaatttatgttggctgtgacaggaatgttcagcattggcccagacaaagttcaa
gttggagctgtacagtattcacataagatgagagtggagttttacatcaatgacaattct
aataatgtgaacttaaagaacgcgattttgaacatcgagcagctccaaggcaacacctat
accggggaggccctgaatttcacgctgtcaataataaaagaagataggaagcataggaca
agccaggttccctgttacctcattgtgctgactgatggcaggtccgcagatgacgtcctg
gagcctgctgagagattaagggctgagcaagtcaccatccatgcagttggcattggggag
gctaacaaagtacaactccaacaaattgctgggggagaagaaagggttagctttgggcag
aactttgattctttaagaagcataaagaatgaagtggttcacagaatctgcactgaaaaa
ggatgtgaagacatgaaggctgacatcatgtttctggtggacagttctggcagtatagga
catgaaaattttggaaaaatgaaaaccttcatgaaaagcctattagctaagattcagatt
ggtccagacagaactcatattggtgtcattcagttcagtgataaaactcgggaagaattc
cagcttaataaatatttcacacaaaacgagatttctgatgcaatagacagaatgtctctc
atcgacaaaaacactttgaccggaaacgcactaatctctgtagatcaatacttcaccccc
gccaggggggcccgtattggggtcaaaaagtttcttatcctcatcacggatggagaagca
caagatgctgtgagagaccctgctaaagctcttcgggacaaaggcgtggtcatcttctct
gtgggggtgtacggagccaataggacgcagctggaggagatcagtggggatggcaacctg
gtcttccaagttgagaactttgatgatctaaagacaatagaaagcaaactcatttttcgt
gtatgtgctctccatgattgtaaaaatattaaagtgttggacattgtgtttgtgctggat
cattcaggcagcataaacacacaagagcaagaaaacatgatggctctaactatccatttg
gtgaagaaagcagatgttggcagcgaccgagttcggattggagctctcaaatactcagac
tatcctgagattcttttccaccttgggaaatactcaaacagatcctcagtcatcgagcac
ctaaggaggcgcagggacaccggagggaatacctatactgccagggctcttgaccacacg
aacataatgttcacagaggaatatggcagccgcatccagcaaaatgtgaagcagatgctg
atcgtcatcactgacggggcatcccatgaccgaactctgctcaacgagactgcattgaaa
ttaagaaacagaggcattgatatctacgcggtgggtgtaggaccggctgaccaacttgaa
cttgaggctatggcagggaataaaagcaagactttccatgtagataatttcaacaaactg
gaagatatttacctgcctctacaagaaagtatgtgtatcaatgcacatgagtggtgtgac
attcaagaagccgatgtggttttcttttgtgacggctccgacatggtctccaactcagag
tttgttaccatgacaactttcgtgtcagaattaattgatcattttaacattcagaaccag
aagataaaaatcgggttggctcaatttgggagtggcttccaaaaaattatcgagttgaaa
aactctctgactataccggagttgaagactcaaattcaaagcattcctaagagcaagggg
tttccgcgaatggacctggcccttaaaaaagtgaaagccatgttcgatccgtcttccggt
gggagaagaaacgctggtgtccctcaaactttggttgttatcacatccggggacccctac
tatgatgtggcagatgaagtgaaaatcctgagaaacctcggaatttgtgtcctggtttgg
ggcataggaaatattcataaggagcaacttctgccgataacaggccattctgaaaaaata
gtcaccctccaagactttaataaattaatgaatgtggatgtgaaaaaaagaatggttcgt
gaaatctgccagagctgcgggaaaaccaattgctttatggacatagtggtcgggtttgac
atttccactcacctgcgggggcagccgctgttccatggccaccctcggctgagatcctac
ctcccaggcatcttagaggacatcagctccatcgggagggtcagctgcggggcaggctca
gacgtgcaggtgaacgtggccttcaaggtgaacaatgaccgagaattccctgccaagttc
caaatctaccagaaagcaatatttgacagcctgctgcaagtcaccgtcaatgggccatct
catctgaatgcacagttcctgcagtcgctgtgggatacatttaaggatcaatctaaatcc
caaggacaggtgctactcatcttttcagatggtcttgggggtgaaagcgagataatgctt
gaaaatcaatcggacaggctcagagaagcaggactcgatgctctgctggtggtgtcccta
aacacgactgcccatgatgagttctccagctttgaatttggaaagggatttgattacatg
actcacctgaccattggcatgagagagctgggcaagatgctgtcacagtacctgggaaac
gtcgcagagaagacttgctgctgcacactctgcaagtgttcggggactccaggtccttat
gggtcccgaggactacaagctgccaagggttctcggggtctgaaaggcagcagaggacac
cggggagaggacggagaccccggaagacgaggagacattggacccctgggagataaaggg
attgcaggatgtccaggagagcagggtcaaaagggagccaaaggattttctggaagtaag
ggagaacaaggagaggatgggattgacggactggatggggaagagggctttcatggacct
tctggggaaaagggagaaaaaggtgatccaggatctcagggaagcccaggttccagaggc
cccccagggggttatggggagaagggcttcccaggagatcctggtaatccaggacaaaac
agtaacatcaaaggacaaaagggctccaaaggagaacaaggaagacaaggtagaactgga
cagaaagggacaccaggcaatcctaattccagaggaaataggggaagggaaggccaaagg
ggacccccaggtgcctcgggggagccgggaaatcgtggacctgaaggtacccagggagcc
gacggattacaaggcccacaggggttaaatggaattcccggcaggaaaggagagaaggga
ggcgaagggcataaaggacctcagggctcttctgggccagtgggagctaaagggaacgtt
ggaagtcctgggccttcagggaaaaaaggagaacctggaattcttggagatccagggcca
atgggacaagctggacagagaggaagacagggagattacggcatcccaggctatggtcct
atgggacgaaaaggaataaagggcccaagaggattccctggagatatggggcaaaagggt
gctgttggtgatcctggaattcctgggggtcctggacccaaaggatttaggggattaaca
cgcactgtaggcctgaaaggtgaagagggaccgccaggacccccaggccctcctggacgg
agaggcatgaaaggcatggcggggaaacctgtatattcccaatgtgatctgatccagttc
atgcgggaccatagtccttgttggaaaggaacgtgtccagtgtacccaacagagctggta
tttgccctggaccagtcctacggtatctccgaacagagatttaatgaaatgagggaaatc
gtcacatccattgtcaatgaccttaacatcaaggaaagtaactgcccggtgggagcgcga
gttgttgtagtttcctatgactcaggcacgagctacctcatccgcaggtcggactaccgt
aacaagaagcagctcctccagcttatttcccaaataaaataccgaccccccacagaagcc
cgagatgttggtaatgcaatgaggtttgtggcccggaacgttttcaagcggacatacgca
ggagccaacgtgaggaaagtcgctgtgttcttcagcaatggacaagcagccagtcggtca
tccatcatcaccgccaccatggagttcagtgccctagacatcagtccggcagtctttgct
cttaatgaaaggattttccttgaggcttttgagtttgacaacactggaacatttcaggtg
atcccagtttctccaaatggagagtatgagccattagaaaaatttcaacactgtacactt
tgctatgataaatgttttccaaatgagtgcatcaaagagatttttttacctgaagatgca
tacatggatgtagccttcctcttagacaattctcagactatagcaaacgaggagtttaag
gctgtgaaaaccttggtgagctctatgattgacaacttcaaaattgcatcagaccctgga
atctcaaactttggcgataggattgccctgttgagctattctccttgggatagatctagg
aaaaagaagggtgtggtaaaaacagagtttggatttacaactttcaacgacagagtccta
atgaagaggcacatccagtcttccctccgacagttagaaggagaaaccacaattggccat
accctactgtgggttgtggagaacctcttcccacaaacaccgaacttgagaaaacacaaa
gtcctttttgtgatctcagctggagaatatcatgagagaaaggaattcttgaagaaggtg
gctctgagggccaaatgtcaaggctatgtcatagttgtgatttccctgggctctacgtat
aaggaggacatggaggagttagccagctacccacttgatcaccatctgatacagcttggg
agaattcataaaccagatctggattatattacgaagtttataaggccatttgtttactca
gtcagacgaggattcaatgagtacccacccccagtgcttgagaatgactgtagactcatc
tcaagaggagaggcttatcaaaatagtgatcccctgcttactcctgagccacatgagatt
tcttcaggagagaacagcttcattggccaggaattaagtgcagggaaagactcgtccttc
ctgtgggaggacaatggaagtgcccatttggtttacgtaccaagccgcgtacttacacca
caagaattaacgatcacatatgcacaagattgggattctgaagaaattgcaagtttaact
tctggacatgaaaaccatggcagaaaagaagaaccaggtcttactaatgaacctggagat
acctctcttcaagaatattacatggatgtggctttcctcatagatgcctcccaaagaata
ggaaatgatgagtttaaggaagtgaaagcttttctaatctcagtgcttgattattttcac
attgccccagacccactgacctccatgttaggagacagagtggcagtcctgagctattct
cctccaggctatatgcccaacagtgaagaatgccccgtctacctggaatttgatttggtt
acttataacagtatacaccaaatgaaacatcatctccaagactcttttcaacagctcaat
ggagatgtttttattggccatgccctgcagtggacaattgaaaatgtgtttgtaggaacc
cccaacctgaggaaaaacaaagttatctttgttatatctgctggcgaaaccaacccctta
gacaaggaagtcttaagaaatgtagctctgagagccaagtgtcagggctactccatattt
gtgttttcctttggtcctatacacaatgacaaggaattggaagaattagccagccaccca
ctggatcatcacttagtccagcttggccgaacccacaagccagatttgaactatatcacc
aagtttgtcaagccatttgttcacttaatcagacgtgccatcaacaaatatccccctgca
gatctgagacccaagtgtgttaacatcacctctcccaacccagagaacgttggctcagga
aacaatgtattccttattcctgaggtatataaaatagagacaggaaacagtgagctgttt
gatgaatttggttcccaggagcagcattcccttgtattagggaacaatcctagtaatggt
tctgagactactactgatttgatccagaagttatacatgctcttttcaaccggagaactg
gtgatgaacgataaggaagagacacattcagaagaaatgccagctctagcagatggtaaa
ctagataaaaaagatggtgaggactcaagatga
DBGET
integrated database retrieval system
