| Entry |
|
|---|
| Symbol |
COL6A1
|
|---|
| Name |
(RefSeq) collagen alpha-1(VI) chain
|
|---|
| KO |
|
|---|
| Organism |
umr Ursus maritimus (polar bear)
|
|---|
| Pathway |
| umr04974 | Protein digestion and absorption |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:umr00001]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103680734 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103680734 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103680734 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103680734 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103680734 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103680734 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:umr04147]
103680734 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:umr00536]
103680734 (COL6A1)
Exosome [BR:umr04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103680734 (COL6A1)
Glycosaminoglycan binding proteins [BR:umr00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
103680734 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
103680734 (COL6A1)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
1027 aa
MKLARALLPLLLQACWATAQDVSGNARAVAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKAFTKRFIDGLRDRYYRCDRNLVWNAGALHYSDEVEIISPLRPMPSDRDALKASVDAV
KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGVKVFSVAITPDHLEPRLSIIATDHMYRRNFTAADWGQTRDAEEIIAQTIDTIIDMIK
NNVEQVCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGEPGRPGDLGPIGYQGM
KGEKGSRGEKGSRGAKGYKGEKGKRGIDGVDGMKGETGYPGLPGCKGSPGFDGAQGPPGP
KGDAGAFGRKGEKGAPGADGEPGRPGNTGPPGDEGEPGLPGPPGEKGEAGDEGNPGPDGA
PGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPVGIPGDPGEAGPAGPKGYRGD
EGPPGPEGSRGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTK
GYPGLKGDEGEAGDPGEDNNDIAPPGVKGAKGYRGPEGPQGPPGHTGPPGPDECEILDII
MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFVVKVLDRLTRDELVKFEPGHSHA
GVVQYSHNQMQEHVDLRDANIRNVQELKEAVKKLRWMAGGTFTGEALQYTRNQLLPPTQN
NRIALVITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDMFGYVAGSDQLNVISCQGLAPQ
GRPGISLVKENYAELLEDNFLKNVTTQICIDKKCPDYTCPITFSSPADITILLDGSASVG
SHNFDTTKRFAKRLAERFLTAGRTDPSHDVRVAVVQYSGPGQQRPERGSLQFLQNYTMLA
STVDGMDFFNDATDVNDALSYVTRFYREASSREAKKRLLLFSDGNSQGATAAAIEKAVQE
AQRADIEIFVVVVGRQVNEPHIRVLVTGKTAEYDVAFGERHLFRVPSYQALLRGVFYQTV
SRKVALG |
|---|
| NT seq |
3084 nt +upstreamnt +downstreamnt
atgaagctggcccgcgctctgctccccctgctgctgcaggcctgctgggccaccgctcag
gacgtctcgggcaacgccagggctgtggccttccaggactgccctgtggacctcttcttc
gtgctggacacctcggagagcgtggccttgaggctgaagccctacggagccctggtggac
aaggtcaaggccttcaccaagcgcttcatcgatggcctgagagacaggtactaccgctgt
gaccgcaacctggtgtggaacgcgggcgcgctgcactacagcgacgaggtcgagatcatc
agcccgctcaggcccatgcccagcgaccgcgacgcgctcaaggccagtgtggacgcggtc
aagtacttcggcaagggcacctacacggactgcgccatcaagaaggggctggaggagctg
cttgtggggggctcccacctgaaggagaacaagtacctgattgtggtgaccgatgggcac
cccctggagggctacaaggagccgtgtgggggcctggaggacgccgtcaacgaggccaag
cacctgggcgtcaaagtcttctcggtggccatcacccccgaccacctggagccacgtctg
agcatcatagccacggaccacatgtaccgacggaacttcaccgcggctgactgggggcag
acccgggacgcggaggagattatcgcccagaccatcgacaccatcattgacatgatcaaa
aacaatgtggaacaagtgtgctgctccttcgaatgccagcctgccagaggacctcccggg
ccacggggagaccctgggtacgagggagaacgtgggaagccaggtctcccaggagagaaa
ggagaagccggagaacccggcaggcccggggacctcggacccatcggctaccaggggatg
aagggagaaaaagggagccgaggggagaagggctccaggggagccaagggctacaagggc
gagaagggcaagcgtggcatcgatggtgtggacggcatgaagggcgagacggggtacccc
ggcctgccaggctgcaagggctcgcccggattcgacggcgctcaaggaccccccgggccc
aagggtgacgcgggtgccttcggacggaaaggagagaagggtgccccaggagctgacggg
gagcccgggaggccagggaacacggggcccccgggagatgagggcgagccgggcttgcct
ggtcccccaggagagaagggagaagccggtgacgagggaaacccgggaccggacggtgcc
cccggcgagaggggcggccctggggaaagaggaccacgggggaccccaggtgtgcggggc
ccacggggagacccgggcgaagctggaccccaaggtgaccagggacgagaaggccctgtc
ggcatccctggagacccgggagaggctggccccgctggacctaaaggttaccgaggtgat
gaggggcccccggggcctgagggttccagaggagctccagggcccgcaggaccccccgga
gaccccgggctgatgggtgaaaggggggaagacggtccacccggaaacggcaccgagggc
ttccctggcttccctggctatccaggcagcaggggcccgcccgggataaacggcactaaa
ggctacccaggcctcaaaggggatgagggagaagccggagaccctggagaggacaacaat
gacatcgcacccccaggtgtcaaaggagcaaaggggtaccggggacccgaaggcccccag
ggacccccaggacacacaggaccgccggggccagatgaatgtgagatcttggacatcatc
atgaaaatgtgctcttgctgtgagtgcaagtgtggccccatcgacatcctctttgtgctg
gacagctcggagagcattggcctgcagaacttcgagatagccaaggactttgtcgtcaag
gtcctcgaccggctgaccagagacgagctggtcaagtttgagcccggccactcgcacgcg
ggcgtggtgcagtacagccacaaccagatgcaggagcacgtggatctgagggacgccaac
atcaggaacgtccaggagctcaaggaagccgtcaagaagctgcggtggatggcggggggc
acgttcacgggagaggctctgcagtacacccggaaccagctgctgccccccacccagaac
aaccggattgcgctcgtcatcaccgacggccgctctgacacccagagggacaccacgccg
ctcagcgtgctctgtggcccggacatccaggtggtctccgtgggcattaaggacatgttc
ggctatgtcgcgggctctgaccagctcaacgtcatctcctgccaaggcctggcaccccag
ggccggccaggcatctcgctggtcaaggagaactacgcggagctgctggaggacaacttc
ctaaagaacgtcaccacccagatctgtatagacaagaaatgtccagattacacctgccca
atcacgttctcctccccggccgacatcaccatcctgctggacggctcggccagcgtgggc
agccacaacttcgacaccaccaagcgcttcgccaagcggctggccgagcgcttcctgaca
gcgggcaggaccgacccgtcccatgacgtccgcgtggcggtggtgcagtacagcggccct
gggcagcagcggccggagcgaggctcactgcagtttctgcagaactacaccatgctggcc
agcaccgtggacggcatggacttcttcaacgatgccaccgacgtcaacgacgccctcagc
tacgtgacgcgcttctaccgtgaggcctcgtcccgcgaagccaagaagaggctgctgctc
ttctccgacggcaactcccagggggccacggcggcggccatcgagaaggcggtgcaggag
gcccagcgggctgacatcgagatcttcgtggtggtggtgggccgccaggtgaacgagccc
cacatccgcgtcctggtcacgggcaagacggccgagtacgacgtggcctttggtgagcgc
cacctgttccgcgtgcccagctaccaggccctgctgcgcggcgtcttctaccagaccgtg
tccagaaaggtggcgctgggctag |
|---|
