Ursus maritimus (polar bear): 103680734
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Entry
103680734 CDS
T03271
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr04151
PI3K-Akt signaling pathway
umr04510
Focal adhesion
umr04512
ECM-receptor interaction
umr04820
Cytoskeleton in muscle cells
umr04974
Protein digestion and absorption
umr05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103680734 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103680734 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103680734 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103680734 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103680734 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103680734 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
umr04147
]
103680734 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
umr00536
]
103680734 (COL6A1)
Exosome [BR:
umr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103680734 (COL6A1)
Glycosaminoglycan binding proteins [BR:
umr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103680734 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
103680734 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
103680734
NCBI-ProteinID:
XP_040477713
UniProt:
A0A8M1F2Q4
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MKLARALLPLLLQACWATAQDVSGNARAVAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKAFTKRFIDGLRDRYYRCDRNLVWNAGALHYSDEVEIISPLRPMPSDRDALKASVDAV
KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGVKVFSVAITPDHLEPRLSIIATDHMYRRNFTAADWGQTRDAEEIIAQTIDTIIDMIK
NNVEQVCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGEPGRPGDLGPIGYQGM
KGEKGSRGEKGSRGAKGYKGEKGKRGIDGVDGMKGETGYPGLPGCKGSPGFDGAQGPPGP
KGDAGAFGRKGEKGAPGADGEPGRPGNTGPPGDEGEPGLPGPPGEKGEAGDEGNPGPDGA
PGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPVGIPGDPGEAGPAGPKGYRGD
EGPPGPEGSRGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTK
GYPGLKGDEGEAGDPGEDNNDIAPPGVKGAKGYRGPEGPQGPPGHTGPPGPDECEILDII
MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFVVKVLDRLTRDELVKFEPGHSHA
GVVQYSHNQMQEHVDLRDANIRNVQELKEAVKKLRWMAGGTFTGEALQYTRNQLLPPTQN
NRIALVITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDMFGYVAGSDQLNVISCQGLAPQ
GRPGISLVKENYAELLEDNFLKNVTTQICIDKKCPDYTCPITFSSPADITILLDGSASVG
SHNFDTTKRFAKRLAERFLTAGRTDPSHDVRVAVVQYSGPGQQRPERGSLQFLQNYTMLA
STVDGMDFFNDATDVNDALSYVTRFYREASSREAKKRLLLFSDGNSQGATAAAIEKAVQE
AQRADIEIFVVVVGRQVNEPHIRVLVTGKTAEYDVAFGERHLFRVPSYQALLRGVFYQTV
SRKVALG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggcccgcgctctgctccccctgctgctgcaggcctgctgggccaccgctcag
gacgtctcgggcaacgccagggctgtggccttccaggactgccctgtggacctcttcttc
gtgctggacacctcggagagcgtggccttgaggctgaagccctacggagccctggtggac
aaggtcaaggccttcaccaagcgcttcatcgatggcctgagagacaggtactaccgctgt
gaccgcaacctggtgtggaacgcgggcgcgctgcactacagcgacgaggtcgagatcatc
agcccgctcaggcccatgcccagcgaccgcgacgcgctcaaggccagtgtggacgcggtc
aagtacttcggcaagggcacctacacggactgcgccatcaagaaggggctggaggagctg
cttgtggggggctcccacctgaaggagaacaagtacctgattgtggtgaccgatgggcac
cccctggagggctacaaggagccgtgtgggggcctggaggacgccgtcaacgaggccaag
cacctgggcgtcaaagtcttctcggtggccatcacccccgaccacctggagccacgtctg
agcatcatagccacggaccacatgtaccgacggaacttcaccgcggctgactgggggcag
acccgggacgcggaggagattatcgcccagaccatcgacaccatcattgacatgatcaaa
aacaatgtggaacaagtgtgctgctccttcgaatgccagcctgccagaggacctcccggg
ccacggggagaccctgggtacgagggagaacgtgggaagccaggtctcccaggagagaaa
ggagaagccggagaacccggcaggcccggggacctcggacccatcggctaccaggggatg
aagggagaaaaagggagccgaggggagaagggctccaggggagccaagggctacaagggc
gagaagggcaagcgtggcatcgatggtgtggacggcatgaagggcgagacggggtacccc
ggcctgccaggctgcaagggctcgcccggattcgacggcgctcaaggaccccccgggccc
aagggtgacgcgggtgccttcggacggaaaggagagaagggtgccccaggagctgacggg
gagcccgggaggccagggaacacggggcccccgggagatgagggcgagccgggcttgcct
ggtcccccaggagagaagggagaagccggtgacgagggaaacccgggaccggacggtgcc
cccggcgagaggggcggccctggggaaagaggaccacgggggaccccaggtgtgcggggc
ccacggggagacccgggcgaagctggaccccaaggtgaccagggacgagaaggccctgtc
ggcatccctggagacccgggagaggctggccccgctggacctaaaggttaccgaggtgat
gaggggcccccggggcctgagggttccagaggagctccagggcccgcaggaccccccgga
gaccccgggctgatgggtgaaaggggggaagacggtccacccggaaacggcaccgagggc
ttccctggcttccctggctatccaggcagcaggggcccgcccgggataaacggcactaaa
ggctacccaggcctcaaaggggatgagggagaagccggagaccctggagaggacaacaat
gacatcgcacccccaggtgtcaaaggagcaaaggggtaccggggacccgaaggcccccag
ggacccccaggacacacaggaccgccggggccagatgaatgtgagatcttggacatcatc
atgaaaatgtgctcttgctgtgagtgcaagtgtggccccatcgacatcctctttgtgctg
gacagctcggagagcattggcctgcagaacttcgagatagccaaggactttgtcgtcaag
gtcctcgaccggctgaccagagacgagctggtcaagtttgagcccggccactcgcacgcg
ggcgtggtgcagtacagccacaaccagatgcaggagcacgtggatctgagggacgccaac
atcaggaacgtccaggagctcaaggaagccgtcaagaagctgcggtggatggcggggggc
acgttcacgggagaggctctgcagtacacccggaaccagctgctgccccccacccagaac
aaccggattgcgctcgtcatcaccgacggccgctctgacacccagagggacaccacgccg
ctcagcgtgctctgtggcccggacatccaggtggtctccgtgggcattaaggacatgttc
ggctatgtcgcgggctctgaccagctcaacgtcatctcctgccaaggcctggcaccccag
ggccggccaggcatctcgctggtcaaggagaactacgcggagctgctggaggacaacttc
ctaaagaacgtcaccacccagatctgtatagacaagaaatgtccagattacacctgccca
atcacgttctcctccccggccgacatcaccatcctgctggacggctcggccagcgtgggc
agccacaacttcgacaccaccaagcgcttcgccaagcggctggccgagcgcttcctgaca
gcgggcaggaccgacccgtcccatgacgtccgcgtggcggtggtgcagtacagcggccct
gggcagcagcggccggagcgaggctcactgcagtttctgcagaactacaccatgctggcc
agcaccgtggacggcatggacttcttcaacgatgccaccgacgtcaacgacgccctcagc
tacgtgacgcgcttctaccgtgaggcctcgtcccgcgaagccaagaagaggctgctgctc
ttctccgacggcaactcccagggggccacggcggcggccatcgagaaggcggtgcaggag
gcccagcgggctgacatcgagatcttcgtggtggtggtgggccgccaggtgaacgagccc
cacatccgcgtcctggtcacgggcaagacggccgagtacgacgtggcctttggtgagcgc
cacctgttccgcgtgcccagctaccaggccctgctgcgcggcgtcttctaccagaccgtg
tccagaaaggtggcgctgggctag
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integrated database retrieval system
