Ursus maritimus (polar bear): 103681822
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Entry
103681822 CDS
T03271
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr04151
PI3K-Akt signaling pathway
umr04510
Focal adhesion
umr04512
ECM-receptor interaction
umr04820
Cytoskeleton in muscle cells
umr04974
Protein digestion and absorption
umr05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103681822 (COL6A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103681822 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103681822 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103681822 (COL6A6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103681822 (COL6A6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103681822 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
umr04147
]
103681822 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
umr00536
]
103681822 (COL6A6)
Exosome [BR:
umr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103681822 (COL6A6)
Glycosaminoglycan binding proteins [BR:
umr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103681822 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
103681822 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
103681822
NCBI-ProteinID:
XP_040492757
UniProt:
A0A8M1GDI0
LinkDB
All DBs
Position
Unknown
AA seq
2267 aa
AA seq
DB search
MLLILFLIIICSYVSMNKDPGPEYADVVFLVDSSDQLGTKSFPLVKAFIHKTVSGLPVDA
HKYRVALAQYSDRLHSEFQLATFKSRNPMLNHLKKNFGFLGGSLRTGHALREAHRTFFSA
PAGGRDKKQFPPILVVLASAQSEDDVEEASKALREDGVRIVSVGLQSASEEELKAMATSR
FHFNLRSARDLGAFSQNMTQIIKEATQYRDGAADDILVEVCQGPSVADVVFLLDVSVNGS
QEDFEYLKEFLEESVSALDIKEHCMRVGLVTYSNETKVINSLSRGVNKSEVLQNIQNLSP
RAGKAYTGAAIRKIRKEVFSARNGSRKNQGVPQIAVLVTHRPSEDNVTKAAVNLRREGVT
IFTMGIEGASDSQLEKIASHPAEQHVSKLKTFSDLAAHNQTFLKKLRNQITHTVSVFSER
TETLKSGCVDTEEADIYLLIDGSGSTQATDFHEMKTFLSEVVGMFNIAPQKVRVGAVQYA
DSWDLEFEINKYTNKHDLGKAVENIRQMGGNTNTGAALNFTLGLLQKAKKQRGNRVPCHL
VVLTNGMSKDSILEPANRLREELVRVYAIGVKEANQTQLREIAGEEKRVYYVHDFDALKD
IRNQVVQEICAEEACKEMKADIMFLVDSSGSIGLENFIKMKTFMKNLVSKSQIGADRVQI
GVVQFSDVNKEEFQLNRYMSQNEISNAIDRMTHIGETTLTGSALTFVSQYFSPAKGARPN
VRRFLILITDGEAQDIVKDPAVALRQEGIIIYSVGVFGSNVTQLEEISGRPEMVFYVENF
DILQHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDHDEYSIMKDFMVDLVKKADV
GKNQVRFGALKYADDPEVLFYLGDLGSKWEVISVLQKDQPMGGNTYTAEALGFSDHMFTE
ARGSRLQKGVPQVLIVITDGESHDADKLNATAKALRDKGILVLAVGIAGANPVELLAMAG
SSDKYFFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFRKMKE
FLASVVQDFDVSVNRVRIGAAQFSHTYRPEFPLGTFVGKKEISFQIENIQQIFGYTHIGA
ALRQVGHYFRPDMGSRINAGTPQVLLVLTDGQSQDEVARAAEDLRHKGIDIYSVGIGDVD
DQQLIQITGTAEKKLTVHNFDELTKVKKRIVRNICTSGGESNCFVDVVVGFDISTHENGQ
TLLEGQSWIETYLQDLLHTISSLNGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSENI
LNSLKDVTVKGPSLLNANLLSSLWDAFQNKSAARGKVVLLFSDGLDDDIEKLEQKSDELR
KEGLNALVTVALDGAADSSDLADLLYIEFGKGFEYRTQLTIGMRDLGSRLSKLLVNVAER
TCCCLFCKCIGGDGIMGDPGPPGKKGSPGFKGSEGYLGEEGIAGDRGAGGPVGEQGTKGC
DGAKGPKGNRGLNGQEGEVGESGIGGLHGEQGESGLPGEKGEKGDEGSQGSPGKRGVSGD
RGAKGQRGDPGVPGFDNTVEGPKGLKGERGRQGRRGWPGPPGTPGSRRKTAAHGRRGHTG
PQGKTGIPGPDGLEGSWGLKGPQGPRGETGVKGEKGGLGSEGPQGPPGPGGEAGSPGHLG
SQGNKGEPGDLGEKGAIGLPGPRGLPGDDGNPGYGSTGSRGAKGQEGFPGESGPKGETGD
PGGPGETGPKGARGKTISTGPPGEMGSPGEPGPPGRKGVKGARGLASFSMCELIQYVRDH
SPGGHGEPECPVHPTELVFALDQSRDVTKQEFERMKELMSSLVRGVRVRETSCPVGARIA
ILTYTSHARHLVRFSDAYRKPQLLREIEAIPYERSSDSREIGKVMRFISRNVFKRTLPGA
HTRRIATFFSSGQSADAQTIAAATMEFSALDIIPVVIAFSNVPSVKRAFAIDDTGTFQVI
MVPSGTDYAPALERLQRCTFCYDVCKPDAFCDQAKPPPAQSYMDAAFLLDSSRHVGSAEF
EDIRHFLGALLDHFEITPEPETSVTGDRVALLSHAPPNFLPNTQKSPVRTEFNLTTYNSK
RLMKRHLEESVQQLNGDAFIGQALQWTLDNIFLNAPNLRRNKVIFVISAGETSHLDKETL
KKESLRAKCQGYALFVFSLGPAWNDKELEDLASYPLDHHLVQLGRIHKPDHRYSVKIVRA
FINSIRRAINKYPPINFKMKCSRLSSTDLKQPPRQWRSFVPGPHKTALKEDALQKAKFFQ
DKKYLPRVARGSRDDTIRNLTRNTFHAFKNGKRVIKTAPNQHDKGSA
NT seq
6804 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgattttgttcctcataataatttgttcctatgtctctatgaacaaagatccc
ggccctgagtatgcggatgtcgtgttcctggtggacagctccgaccagctgggaactaag
tccttccccctcgtgaaagcgttcattcacaaaacggtcagcggtctgcccgtagacgcc
cacaagtaccgcgtggccctggcgcagtacagcgaccggctccacagcgagttccagctg
gccacgttcaagagcaggaaccccatgctgaaccacctcaagaagaacttcggcttcctt
ggcggctccctgcggaccggccatgctctccgggaggcgcacaggaccttcttctctgcg
ccggccggcgggagggacaagaagcagtttcccccgattctggtggtcctggcctcggcc
cagtccgaggatgacgtggaagaggcctccaaggccctgcgggaagacggggtgagaatc
gtctccgtggggctgcagagtgcttctgaggaggagctgaaggccatggccacctctcgg
tttcatttcaacctccggtcggccagggaccttggcgcgttttcccaaaacatgactcag
atcatcaaggaggccacccagtacagggacggagcggccgatgatattcttgtggaagtc
tgccaaggcccgtctgtggctgacgtggtgttcctgttggatgtgtctgtcaatggcagc
caggaggactttgaatatcttaaggaattcctggaagagagtgtatctgctcttgacata
aaggaacactgcatgagggttggcctcgtgacctacagcaatgagaccaaggtgatcaat
tctctcagcaggggcgtaaataagtcagaggttctccagaatatacagaacctctctccg
cgggctgggaaggcttacacaggagctgccatcagaaagatcaggaaggaagtgttcagt
gcgcgcaacggcagtcggaagaatcagggggtgccccagattgccgtgctggtgacccac
agaccctcagaggataacgtgaccaaggcagccgttaacctccggcgcgagggcgtgacc
atcttcaccatgggcatcgagggggccagcgacagccagctggagaagatcgcctctcac
cccgccgagcagcatgtgtccaaactgaaaaccttctccgacctggccgctcacaaccag
acgtttctgaagaagctgcggaaccagataacacacacagtctctgttttttcagaacgc
accgaaactctcaaatctggttgtgtggatactgaagaagcagacatttatctgctcatt
gacggctctggaagcacccaggccacagacttccatgaaatgaagaccttcctgtcagag
gtggtaggaatgttcaacatcgctccccaaaaggtgcgggttggggctgtccagtacgct
gacagctgggacttggaatttgagatcaacaaatacactaacaaacacgacttgggaaaa
gccgttgagaacatccggcagatgggtgggaacacaaacacgggtgcagccctgaatttc
acactagggctcttgcaaaaagcaaagaaacagcgaggaaaccgagtgccctgtcatctt
gttgtcctgacgaatggcatgtccaaggatagcatcctggagccagcgaacagactgcga
gaagagctcgttcgtgtttatgccattggggtcaaggaggccaaccaaacacagctgcga
gaaattgcaggcgaggagaagagggtatactacgtgcatgacttcgatgctttgaaagac
ataaggaaccaagttgttcaagaaatctgtgctgaagaagcctgcaaagagatgaaagcg
gacatcatgtttctggtggacagttctggcagtataggactggaaaacttcatcaaaatg
aaaacattcatgaaaaacctggtgagcaaatctcagattggggcagatcgggtacaaatc
ggcgtagtccagttcagcgacgtcaataaggaggaatttcagctcaacagatatatgtcc
caaaatgaaatttcaaatgcaatagaccggatgactcacattggagaaaccaccttgacc
ggtagtgccctgacctttgtgtctcagtacttcagccctgccaagggggcccggcccaat
gtcaggaggtttctcatcctcatcactgacggtgaagctcaggacatagtcaaggaccca
gcagtcgcacttcgacaggaaggcataattatctactctgtgggggtgtttggttccaat
gtcacccagcttgaggaaatcagcgggaggccggagatggttttttatgttgagaatttt
gatattctgcagcacattgaagatgatcttgtttttggaatatgcagcccccgtgaagaa
tgcaagcggattgaagttttggatgttgtgtttgtaattgatagctctggaagcattgac
catgatgaatatagtatcatgaaagactttatggttgacttggtgaaaaaagctgatgtc
ggcaagaatcaggtccggtttggggctctgaagtatgctgatgacccagaggtgctgttt
tatctgggtgaccttggctcaaaatgggaggtgatttcggtgctccagaaggaccagccc
atggggggcaacacttataccgcggaggcattaggcttctcagaccacatgttcactgaa
gcccggggcagccgtctgcagaaaggggtcccccaagtcctcattgtgatcaccgatggg
gagtcccatgatgcagataagctcaatgccacagccaaggccttgagggacaaaggcatt
cttgtcctggccgtggggattgctggtgccaatcctgtggagctgctagccatggcagga
tcgagtgacaagtacttctttgtggagacatttggaggcctgaaggggatattttcagat
gtgtcagccagtgtatgtaactcttcaaaagtagattgtgaaattgaaaaagtagatctt
gttttcctcatggatggctcaaatagcattcacccagatgacttcaggaagatgaaggaa
ttcttggcatcagttgttcaagacttcgatgtcagcgtcaacagagtgcgcataggtgct
gcccagtttagccacacctatcggccggaatttccactgggaactttcgtaggcaaaaag
gagatctcatttcagattgaaaacatccagcagatctttggatacacacacattggcgct
gccctccggcaggtggggcattacttccggccagacatgggtagccggataaatgcaggt
accccgcaggtgttgctggtcctcacagacggccagtcccaggatgaggtggcccgggcc
gctgaagacctgagacacaaagggattgacatttactcggtgggcattggcgacgtggat
gatcagcagctcattcaaatcactgggaccgcggaaaaaaaactgacggttcataacttt
gatgaactgacaaaggtcaagaaaaggatagttcgaaacatctgtacctcggggggtgag
agcaattgttttgtggacgttgtggtgggatttgacatctcaactcatgagaatgggcag
actttgcttgaaggtcaatcttggatagaaacctaccttcaagacctcttacataccatc
agctccctcaatggggtaagctgtgaggtgggtacagagacgcaagttagcgtggctttt
caagtgaccaatgccatggaaaaatattcacccaagtttgagatctatagcgaaaacata
ctgaacagcttgaaggatgtaacagtaaaaggaccatctcttctcaacgcaaacctcttg
agttctctatgggatgcatttcagaataaatcagctgctcgaggaaaggtggttctctta
ttttcagatggattggatgatgacattgaaaagcttgaacaaaaatctgatgaacttaga
aaagaaggcctgaatgccctcgtaacggttgctctggatggagccgctgattcaagtgac
ctggccgatcttctctacattgaattcgggaaagggtttgagtacaggacccagctgact
attggaatgagggaccttgggagccgactgtcaaaactactggttaatgttgctgaaagg
acatgctgttgtttattctgcaagtgcattggaggggatggcataatgggggatcctgga
ccaccagggaaaaagggatccccaggttttaaaggcagtgagggctatctgggagaggaa
ggcattgctggagacagaggagccggtggaccagtgggagagcaaggtactaagggatgc
gatggtgccaaaggtcctaagggaaacaggggactaaatggacaggagggagaagttgga
gaaagcggaattggaggattacatggagaacagggtgagagtggtcttcctggagaaaaa
ggagaaaagggtgatgaaggatcccagggaagcccaggaaagcgaggagtttctggtgac
cgaggtgcaaagggccagcgaggagaccctggagttcctggatttgacaataccgtagaa
ggacctaagggcttgaaaggagaacgtggaagacaaggtagaagaggctggccgggcccc
cctggaacaccaggctccagaagaaagacagcagctcatggccgaaggggacatacaggc
ccacaggggaaaacaggcatcccaggcccagatggacttgaaggctcatggggacttaag
ggccctcagggccccagaggagagactggtgtgaaaggtgaaaaaggaggtctgggaagt
gaaggtcctcaggggcctccgggaccaggaggagaagctgggagtccaggccatttggga
agccaaggaaataaaggagagcctggagatttgggagaaaaaggagcaattggtctccca
ggtcctcgaggcttgccgggtgatgatggcaacccaggttatggtagcactggaagtaga
ggagcaaaggggcaagaaggatttcctggagaaagtggaccgaagggtgagactggggac
cctggtggtccaggagaaactggacccaagggagctagaggcaagacgatatccactggg
cctccaggagagatgggatcccctggggagccaggacctcctggacgcaagggtgtgaaa
ggagccagaggattggcttcattttctatgtgtgagctcattcagtatgtacgggaccac
agccctggcggacatggagaaccagaatgcccggtgcatcccaccgaattggtgtttgcc
ttggaccagtctcgagatgtcaccaagcaggaattcgagcgcatgaaggagctgatgtct
tccctggtgaggggcgtccgggtccgggagaccagctgcccggtgggcgcgcgcatcgcc
atcctcacctatacctctcacgcccggcacctcgtccgcttctcagacgcctaccggaag
ccgcagctcctcagggagatcgaagctattccttacgagcggtcctcggacagcagggag
atcggcaaagtgatgaggttcatctccaggaacgtcttcaagcgaacgcttccaggcgcg
cacacgagaagaatcgccaccttcttcagcagcggtcagtctgccgatgcccagaccatt
gccgcggccactatggaattcagtgcccttgacatcattccggtcgtgatcgcgttcagc
aacgtgccctccgtcaagcgtgcgtttgcgattgatgacactggcacattccaagtcata
atggttccatccgggaccgactacgcgccagcgttagagagactccagcggtgcactttc
tgctatgatgtctgcaagccagacgctttttgcgatcaagccaaaccgccccctgcacag
tcttacatggatgctgcgttccttctggacagctcccggcatgtgggaagtgctgaattt
gaagacataagacactttttgggagcactgttagatcactttgagatcaccccagagcct
gagacctctgtcactggagatcgggtggctctattaagccatgctccccccaacttccta
cccaacactcagaagagtcctgttagaactgagttcaacctcaccacctacaacagtaaa
cgcctcatgaagaggcacctggaagaatcagtgcagcaactaaatggagacgctttcatt
ggtcaggccttacagtggaccctggacaatatctttttaaatgctcccaatctgagaaga
aacaaagtcatatttgtgatctctgctggggaaaccagtcacttggacaaggagacctta
aagaaagaatccttgagagccaaatgtcaaggttatgccctatttgtgttttcccttggc
cctgcttggaatgacaaggaactagaagatctagccagctaccctttggatcaccacttg
gtccagcttggccgaattcataaacctgaccacagatacagtgtgaagattgtgagagcc
tttataaactcaatcaggcgtgcaatcaacaaatacccaccaataaacttcaaaatgaag
tgcagtagactcagctctacagatctgaagcagcccccacggcagtggcgaagctttgtt
cctggaccacataaaactgccctcaaagaagatgcattacagaaggcaaagttctttcaa
gataaaaaatatcttccaagagtagcaagaggcagcagagatgatactattcgaaatctt
accagaaacacattccatgcctttaaaaatggaaaaagggtgataaaaactgctccaaac
caacatgacaaaggaagtgcttga
DBGET
integrated database retrieval system