Undibacterium sp. KW1: UNDKW_0718
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Entry
UNDKW_0718 CDS
T08678
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
und
Undibacterium sp. KW1
Brite
KEGG Orthology (KO) [BR:
und00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
und03400
]
UNDKW_0718 (sbcC)
DNA repair and recombination proteins [BR:
und03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UNDKW_0718 (sbcC)
Archaeal homologous recombinant proteins
UNDKW_0718 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
nSTAND3
ABC_tran
AAA_22
AAA_21
SMC_N
MMR_HSR1
RsgA_GTPase
MukB
Motif
Other DBs
NCBI-ProteinID:
BBB58991
UniProt:
A0A6N4SZZ5
LinkDB
All DBs
Position
complement(785220..789029)
Genome browser
AA seq
1269 aa
AA seq
DB search
MKILAIRGKNLASLAGEFAVDFTQEPLQSAGLFAISGPTGAGKSTLLDALCMALYENTPR
LIKAGTTKLPDGADAVTQQDTGNLLRRGTGEGYAEVDFVGTDGNAYRSRWSVRRSRNKAT
GILQPTTMSLHQLPQLQPIGGKKTEVKEEIIKRLGLKFEQFTRAVLLAQNEFSSFLKADD
NDRGELLETLTGSDIYGQISQRAFARAKLEREALERFHVRLADNKPLSAEERTQLETDLG
LSKTRLEQLDAQLAEVQTHLRWHADDGKLLQGEQQAQQQLQIHEQEKTAAATRAAYLQQV
ESIQTARPLLTELDRLQQTINQGQADIATAHNNIQTSTLSAQEKHLALTQAQQALQQAEH
ALQEATPMLDATKALDSSLNILRSNWLAAQQTKVQAEQALATARQQHKNKQADLAQLHKK
QQDLQIWLTQHAGLQSLADNWTAWELLLKQAATAKKDADYQQQNILNLQKQKDTQEQLLA
ERALQLQASEQSWITTENLREQAAAKLAQFDLPSMQAQRLALDQRRELLSNAIDLHKQMH
EQAQRKQVLDNLQQASHSSMLATDKTIAQINAQLPSLIAAKEQAQKSLQLTQAACNANVE
SLRDALQDEQACPVCGATEHPYKTGNLQLHALLVQLENELKHCQQVEQDQRQLLATATAE
HRQYQQQQKQLQQDLAVLQQQEKIVASTWQAHSIAAELQNAKIENEQASTWLSQQQTGLQ
EQVQQLLKTEQAYQQATKIRDEAFATTEKVRRTLQEHRDSHTALTHALEKFSTALTQATE
KEQDASQRLDDALAQLAPAFVAQSDEGNSWQDNWHAAPLEFQNQCAIHVQQWQSHQLASS
QSTEQLAKLQLEIDKLQTQSQQLEEQFSSDNKRYLDADTALKRQQAKRQELFQGRAVSEV
ETQFTLSINRAKAVLQTQLQAHDEIRQQLARLHEAQEQINKRIAQQSQELHVATEKLQDW
ITQQQATIENLDEAHLRELLAHPHAWIDAERQAMQAINNAVQQATTILRERSQQRQQHLL
QRPTPLSFTKAEPMHDETEQESETAPIDIGESEHLQSVFSNISEKRQQAQQEYSRHQLTM
AQDEARHQQAKSLIATMQEQESQTRLWAQMNELIGAADGKKFRNYAQQITLDVLLAYANQ
HLHQLSRRYRLQRVADTLALMVIDQDMGDEQRSVHSLSGGESFLVSLALALGLASLSSNR
IRVESLFIDEGFGSLDADTLRIAMDALDSLQAQGRKVGVISHVQEMTERISTRIQVQRVS
GGSSLVQVA
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgaagatactcgccatacgcggtaaaaacctggcttctctcgctggtgaatttgcggtc
gatttcacgcaagagcctttgcagtctgccggcctgttcgccatcagtggccccaccggt
gcaggtaaaagtaccttgctggatgccctgtgcatggccctctatgaaaacacgccaagg
ctgatcaaggcaggcacgacaaaactgcccgatggtgcagatgcggtgacccagcaagat
accggcaacctgctcaggcgcggcactggcgaaggttatgccgaagtggattttgtcggc
accgacggcaatgcctatcgctcacgctggagcgtgcgccgctcgcgcaataaagccacc
ggcatcttgcagcccacaaccatgtcgctgcaccagttaccgcaattgcaacccataggt
ggcaagaaaaccgaggtcaaggaagaaatcatcaagcgccttggtctaaagtttgaacaa
ttcacccgcgcagtgttgctggcacaaaacgagttttccagctttttaaaagccgatgac
aatgaccgtggcgaattgctggaaaccctgaccggcagcgatatttatggccagatttca
caacgcgcctttgcccgcgccaaactggaacgcgaagcgctggaacgctttcatgtgcgc
ctggcagacaacaaacctctgagcgcagaagaacgcacacaattagagacagacctgggt
ctcagcaaaacccggttggaacaactggacgcccaactcgcagaggtgcaaacacatttg
cgctggcatgccgatgacggcaaattgctacaaggcgaacagcaggcacagcagcaattg
caaattcacgaacaggaaaaaacagccgccgcaacaagagccgcttatctacaacaagta
gaaagcatacaaactgcgcgcccattgctgacagaactcgaccgcctgcaacagacaatc
aaccagggccaggcagacattgccacagcgcataacaacatacagacaagcacactcagc
gcacaagaaaaacatctggccctgacgcaagcacagcaagcattgcagcaagccgaacat
gcgctgcaagaagcaacgcctatgctggatgccaccaaggcactcgacagcagcctgaat
attttgcgtagtaactggctggctgcacaacaaacaaaagtgcaggcagaacaggcgctg
gcaactgcaaggcagcaacacaagaacaaacaagctgacctggcacaactgcacaaaaag
cagcaagacctgcaaatatggctgacccaacacgcgggcttgcaaagcctggccgataac
tggacagcatgggaattattattgaagcaggcagcaactgccaaaaaagatgcggactac
cagcaacaaaacatacttaatctacaaaaacaaaaagacacgcaagaacaattattggca
gaacgcgctctgcaactccaggcgagcgaacaaagctggataactactgaaaatttacgc
gaacaagctgcagcaaaactggcacagttcgacttgcccagcatgcaggcacaaagactg
gcacttgatcaaaggcgcgaactgttaagtaatgctattgacttgcacaagcaaatgcat
gaacaggcacaacgcaaacaggttttggataacctgcagcaagccagtcattcaagcatg
ctggctacggataaaaccattgcccagatcaatgctcaattacccagcctgattgctgca
aaagaacaggcacaaaaaagcctgcaactgacccaggccgcctgcaacgccaatgtagaa
agcctgcgtgatgctctgcaagatgagcaagcctgcccagtctgcggagcgactgaacat
ccctacaaaaccggcaacctgcaattgcatgccttgctggtgcaactggagaacgaactc
aaacattgccagcaagttgagcaagaccagcgccagttactggcaaccgcaacggctgag
cacaggcaatatcaacaacagcaaaaacaattgcaacaagatctggcggtattgcagcaa
caggaaaaaatcgtagcaagcacctggcaagcgcatagcatcgccgctgaattgcagaat
gcgaaaatcgagaatgaacaagccagtacctggttaagccagcaacaaactggcttgcaa
gaacaagttcagcaattgcttaaaaccgagcaagcctatcaacaggcaacaaagatcagg
gatgaggcatttgccactacagaaaaagtacgccgcaccttgcaagaacatagagacagc
cacacagcactgacccatgctcttgaaaaattcagcactgcactgacgcaggcaacagaa
aaagaacaggatgccagtcaaagactggacgacgccctggcccaattggcaccggcattt
gtcgcacaatcagatgaaggcaacagttggcaagacaactggcatgcagcgccactggaa
ttccagaaccagtgtgcaatccatgtacagcaatggcagagccatcaacttgcatccagc
cagagtactgaacaactggcaaagctacagctggaaatcgacaaactgcaaacacaatcc
cagcaactggaagaacagttttccagcgacaacaaacgctacctggatgcagatactgca
ttaaaacggcagcaggccaaacgacaggaattattccaggggcgcgccgtcagcgaggta
gaaacgcaattcacactgagcatcaatcgggcaaaagcagtactgcaaacccaactgcaa
gcgcatgatgagatacgccagcaactggcacgcctgcatgaagcgcaagaacaaatcaat
aaacgcatcgcccagcaaagccaggaactgcacgtcgcaactgaaaaactgcaggactgg
ataactcagcagcaagccactatagaaaacctggacgaggcgcacttgcgtgaattgctg
gcacatccacatgcgtggattgatgcagaacgccaggccatgcaagccatcaataatgca
gtccagcaagccacaaccatattgcgtgaacgcagccagcaaaggcaacagcacttgcta
caacgtcccactccactcagttttactaaggcagaacccatgcatgatgagactgaacaa
gaaagtgagactgcgccaattgatataggcgagagcgaacatctgcaatccgtgttcagc
aatatcagtgagaaacgccaacaggcacagcaagaatacagccgccatcaactcacgatg
gcgcaggatgaagcacgccaccagcaagccaagagcctgatcgcgaccatgcaggagcaa
gaaagccagacccgcctttgggcacagatgaatgaattgataggtgcagcagacggcaag
aaattccgtaactatgcccagcaaatcacgctagacgtcttgctcgcctatgccaaccag
cacctgcaccagctctcacgccgctaccgcctgcaacgcgtggcagacacgctggccttg
atggtcatcgaccaggacatgggcgatgaacagcgctcagtgcattcgctgtccggcggc
gaatctttcctggtatcgctggcgctggcgctgggcctggcatcgctgtcgagcaaccgc
atcagggttgaatccctgttcatcgacgaaggcttcggcagcctcgatgcagataccctg
cgcatcgccatggatgccctcgacagcctgcaagcgcaaggccgcaaggtgggtgtgatt
tcgcatgtgcaggagatgacggagagaatatcgacaaggatacaagtacaaagagtatcg
ggcggaagcagcctggtacaggttgcctga
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integrated database retrieval system
