Undibacterium sp. KW1: UNDKW_0719
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Entry
UNDKW_0719 CDS
T08678
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
und
Undibacterium sp. KW1
Brite
KEGG Orthology (KO) [BR:
und00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
und03400
]
UNDKW_0719 (sbcD)
DNA repair and recombination proteins [BR:
und03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UNDKW_0719 (sbcD)
Archaeal homologous recombinant proteins
UNDKW_0719 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BBB58992
UniProt:
A0A6N4SYC4
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Position
complement(789026..790273)
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AA seq
415 aa
AA seq
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MRFIHTSDWHLGQTLHSAERGLEHQHFLDWLITALEQQQADALLIAGDVFDNANPSASSQ
KQFYRFLQQAKARLPKLDIVIIAGNHDSPGRLEAPGPLLDGMDISVIGMVPRLSDGSIDV
AAMVLPLRQNDEIVAWCLAVPFLRPGDVPRVENASDPYMAGIAQLYKDVTAHALSLRQPG
QAVIAMGHCHMVGGEISEDSERRIVIGGTEALSASMFGNDITYAALGHLHLAQRVGKQEH
LRYCGSPLPLSFSEVDYQHQVLCVDIEGDKLTQVTPLYVPRTIQLLRIPKQAAALPTVLD
ALDGLELASITDASKGRQYDPYLEVRVKLEAPEPGLRARIESYIEGKPLRLLKIDTHYPG
KAQDETSDEQATQDTLDRLQPEDIFRRLYHGKYQQDAPDDMLQAFGELLHGEDTP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcttcatccacacctcagactggcacctgggccaaaccctgcacagcgccgaacgc
ggcctggaacaccagcacttcctcgactggctcatcactgcgctggaacagcaacaggca
gatgctttgctgatcgccggtgatgtgttcgacaacgccaatccgtctgcaagttcacaa
aaacagttttaccgcttcttgcagcaagccaaggcacgcctgcctaaactggatattgtc
atcatcgctggcaaccatgactcaccgggcaggctggaagcacctggcccgctcttggat
ggcatggacatcagcgtcataggcatggtgccacgcctgagtgatggcagcatcgatgta
gccgccatggtcttgccattacggcagaatgatgaaattgtcgcctggtgcctggcggtg
cccttcttgcggcccggcgatgtgccaagagtagaaaatgccagcgatccctacatggca
ggcatcgcccagttatacaaggatgtgacggcacatgcactcagcctgcgccagcctggt
caggccgtcatcgctatggggcattgccatatggtaggtggcgaaatatcagaagactct
gaacgccgcattgtcatcggtggtaccgaggctttgtccgccagcatgtttggcaatgac
atcacttatgcggcactgggtcatttgcatctggcgcaaagagtcggcaagcaagaacac
ctgcgctattgcggcagccccctgcccctgtcattttctgaagtagattatcagcatcag
gttttgtgtgtggatattgagggcgacaaactcactcaggtgacaccactgtacgtacca
cggacgattcaactcttgcgcatccccaaacaggccgcagctcttcccactgtgctggat
gcgctcgatggtcttgaactcgccagcatcactgatgcgagcaaagggcggcaatatgat
ccctatctggaagtccgggtcaagctggaagcaccagaacctggcctgcgtgcccgcata
gaaagctatatcgagggcaagcccttgcgcttgctgaagatagatacgcactacccaggc
aaagcgcaggatgagactagcgacgaacaggcaacgcaggatacgcttgaccgcttgcaa
ccagaagatattttccgccgcctgtatcacggtaaataccagcaagatgctccggacgac
atgctgcaggcttttggcgaactcttgcatggtgaggacacgccatga
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