Undibacterium sp. KW1: UNDKW_0786
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Entry
UNDKW_0786 CDS
T08678
Symbol
rtcR
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
und
Undibacterium sp. KW1
Brite
KEGG Orthology (KO) [BR:
und00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
und03000
]
UNDKW_0786 (rtcR)
Transcription factors [BR:
und03000
]
Prokaryotic type
Other transcription factors
Others
UNDKW_0786 (rtcR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA
AAA_5
AAA_16
AAA_22
NACHT
AAA_14
AAA_30
AAA_19
MCM
AAA_2
IstB_IS21
AAA_7
ABC_tran
AAA_29
AAA_33
BrxC_BrxD
T2SSE
Motif
Other DBs
NCBI-ProteinID:
BBB59059
UniProt:
A0A6N4SZ03
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All DBs
Position
complement(861549..863162)
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AA seq
537 aa
AA seq
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MIKKKKVVIGFIGTQLDSGRGSGRWEKWRPTVALTQHEDIVIDRIDLLYSGQHELLLAQL
EKDIADTSPETKVRSHQLAIQDPWDFEDVYGCLFDFARSYPFDTDKEEYWVHITTGTHVA
QICLFLMTEASYLPGKLLQTSPPRRQTKGNFGEMTIIDLDLSRYDQIAQRFSREQEEGVA
FLKSGIATRNARFNTMIDEIERVAIKSKAAILLMGPTGAGKSFLARRVFELKKARHRLEG
KFVEVNCATLRGDGAGSTLFGHIKGSFTGAMSDRPGLLRTAHKGLLFLDEIGELGLDEQA
MLLKAVEEKRFFPVGGDHEVQSDFQLVAGTNRDLGKEVAAGRFREDLYARINLWSYELPG
LSGRVEDIAPNIDYLLSQYSAENGQMVRFNKEAKDSYMEFATSAQAVWAGNFRDLSASVT
RMATLADAGRINDQNAGEEIKRLQRLWSHAHDDGRDTRELDLHDYLDAEQLAQLDLFDAV
QLRAVLAICLRSKNMSEAGRKLFAASRSNKANPNDADRLKKYLNKFGLQWDTLHKNG
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgattaagaagaaaaaagtcgtcatcggttttataggcacccaacttgatagcggtcgc
ggtagcggtcgctgggaaaaatggcgacctacggttgctttgacccagcatgaagatatc
gtcatagaccgcattgatttgctgtacagcggtcaacatgagctcttgctcgcgcagttg
gaaaaggacatcgccgatacctcgccagaaacgaaagtacgttcacatcagttagcaata
caggatccctgggattttgaagatgtgtatggctgcctatttgactttgccaggtcttat
cccttcgataccgacaaagaagaatactgggtgcacatcaccactggcactcacgtcgcg
caaatctgcctgttcctgatgacagaagccagctacctgccaggcaagctcttgcagact
tcgccgccacggcggcagaccaagggcaattttggtgagatgaccatcattgacctggac
ctgtcacgctatgaccagatcgcccagcgttttagccgtgagcaggaggaaggtgtagca
tttctgaagtctggcattgccacccgcaatgcgcgcttcaataccatgattgatgaaata
gaacgcgtggccatcaagtccaaggcagccatcctgctgatggggcctactggtgcagga
aaatctttcctggcgcgacgtgtctttgaattgaaaaaagccaggcacagactggaaggc
aagtttgtcgaagtcaactgtgccacactgcgtggtgacggtgcgggctctaccctgttt
ggtcatatcaagggctcattcaccggcgcgatgtctgaccgccccggtttgctgagaaca
gcccacaagggcttgctgtttcttgatgaaattggtgagctgggcctggatgaacaagcc
atgctgcttaaggcggtagaagaaaaacgtttcttcccggttggtggcgaccatgaagtg
caaagtgattttcaactagtggcgggtaccaaccgcgatctgggcaaagaagtggcggca
ggccgtttccgtgaagatttatatgcgcgtatcaatctatggtcatatgaattgcctggc
ctgagtgggcgggtagaagacattgcgccgaatatcgattatctgctatcgcaatacagc
gccgagaacgggcagatggtacgcttcaataaagaggcgaaagacagttatatggaattt
gccacttcggcccaggcggtgtgggcaggtaacttccgcgatttgtctgcctccgtcacg
cgcatggccacgctggctgacgccgggcgcatcaatgaccagaatgcaggtgaagaaatc
aaacgcctgcaacgcctgtggtcgcatgcacatgacgatggcagagacacgcgtgaactg
gatttgcatgactatctggatgcagaacagcttgcgcaactggatttattcgatgcggtg
caattgcgggccgtgctggcaatatgtctgcgctctaaaaatatgtcggaagctggccgc
aaattgtttgccgcgtcacgcagcaacaaagccaacccgaatgatgcagacaggctcaag
aaatatctgaacaagtttggcttgcagtgggataccctgcacaagaatggatga
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