Undibacterium sp. KW1: UNDKW_0858
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Entry
UNDKW_0858 CDS
T08678
Symbol
pilR
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
und
Undibacterium sp. KW1
Pathway
und02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
und00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNDKW_0858 (pilR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
und02022
]
UNDKW_0858 (pilR)
02035 Bacterial motility proteins [BR:
und02035
]
UNDKW_0858 (pilR)
Two-component system [BR:
und02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
UNDKW_0858 (pilR)
Bacterial motility proteins [BR:
und02035
]
Pilus system
Twitching motility proteins
UNDKW_0858 (pilR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
HTH_28
FleQ
VpsR
AAA_19
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBB59131
LinkDB
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Position
946103..947557
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AA seq
484 aa
AA seq
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MSMMEAAACPRILVVDDEAHLRELLEITLIKMGLDVDSAETLALARAHLSKRSYALVLTD
MRLPDGSGMELVQEVNSLYKSTPIAVITAFGSADNAVVALKAGAFDYVSKPVALDQLRKL
VRSALQTNEVQKVQLATPEKLNVPANSFMIGQSQGMQEVRAQISRLARSMAPVIITGESG
SGKELAAREIHSSSARADKPFIAVNCGAIPETLMEAEFFGYRKGAFTGAADDRDGFFQAA
NGGTLMLDEVADLPLPMQVKLLRAIQERRVRKVGATVEEAVDVRIISATHQNLAICVEEG
RFRQDLYYRLNVIELHLPPLRERLEDIVELSRNILKKLTGNDVDMSVEAIDALISYDFPG
NVRELENILERAVAFANDGCIEVSDLALRGTRKLPELPIAQPVPTAVVNNHSDIVPELPA
VTALDVFSAPSLPCSLPDYLESVEREMIRRALQQTRNNRTQAAELLGVSFRQLRYQIQKL
KIQE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgatggaagctgcggcctgtccccgcatcctggtagtggatgatgaggcgcac
ctgcgtgagttgctggagattaccctgatcaaaatggggctggatgtcgatagcgcagaa
accctggcactggcccgcgctcacctgagcaagcgtagctatgcactggtactgaccgat
atgcgtctgcctgacggatcgggcatggaactggtacaggaggtaaatagcctctataag
agcacacctattgccgtgatcaccgcttttggcagtgctgacaatgccgtggttgccttg
aaggccggtgctttcgactatgtttccaagccagtggcgcttgaccagttgcgcaagctc
gtcaggtcggccctgcaaaccaatgaggttcaaaaagtacaactggcgactccggaaaaa
ctgaatgtccccgccaattctttcatgataggccagtcgcaaggcatgcaagaggtcagg
gcgcagatcagccgccttgcacgcagcatggcaccggtcattattactggcgaatctggt
agcggcaaggagttggcggcgcgcgaaatacacagcagcagcgccagggccgacaagcct
tttatcgccgtcaattgcggggcaattcccgagaccttgatggaagctgaattctttggt
tacagaaaaggtgcatttactggtgccgctgatgacagggatggtttttttcaggctgcc
aacggtggcaccctgatgcttgatgaagtggctgacctgcctttgcccatgcaagtcaag
ttactgcgtgccatacaggaaaggcgcgtgcgcaaggttggtgccacggtcgaagaggca
gttgatgtgcgcattatcagtgcgacccaccagaacctggcgatctgtgtagaagagggg
cgcttccggcaagacctgtattaccgcctgaatgtcattgaattgcacttgccacctctg
cgcgaaagactggaggatatagtcgagctgtcgcgcaatatcctcaagaaactgacaggt
aatgatgttgatatgtcagtagaggcaattgacgcgttgatcagttatgactttcccggc
aatgtgcgtgagctggaaaacatattggagcgtgcagttgcctttgccaatgatggctgc
atagaggttagcgacctggccttgcgcggaaccaggaagttgcctgaactgccgatagca
cagcccgtcccgaccgctgttgtcaataatcatagcgatattgttcctgaattacccgct
gttaccgcgctggatgtattctctgctccaagtttgccttgctcgctgcccgactatctc
gaaagcgtagagcgcgaaatgatacgccgtgccctgcagcagacccgtaacaaccgtacc
caggcggcagaattgctgggcgtcagtttccgtcaactgcgttaccagatacaaaaactg
aagatccaggagtaa
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