Undibacterium sp. KW1: UNDKW_2411
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Entry
UNDKW_2411 CDS
T08678
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
und
Undibacterium sp. KW1
Pathway
und03030
DNA replication
und03430
Mismatch repair
und03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
und00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UNDKW_2411 (holB)
03430 Mismatch repair
UNDKW_2411 (holB)
03440 Homologous recombination
UNDKW_2411 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
und03032
]
UNDKW_2411 (holB)
03400 DNA repair and recombination proteins [BR:
und03400
]
UNDKW_2411 (holB)
Enzymes [BR:
und01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UNDKW_2411 (holB)
DNA replication proteins [BR:
und03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UNDKW_2411 (holB)
DNA repair and recombination proteins [BR:
und03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UNDKW_2411 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
DNApol3-delta_C
RNA_helicase
TsaE
NACHT
NPHP3_N
ResIII
nSTAND3
AAA_22
AAA_5
AAA_33
Mg_chelatase
AAA_14
VapE-like_dom
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BBB60684
LinkDB
All DBs
Position
2665521..2666561
Genome browser
AA seq
346 aa
AA seq
DB search
MTQHPLYSWQEDAWQQIQALGQRLPHAFLLHGPQGIGKTVFAEHLAQSLLCENPWQGGHA
CQQCGSCGWFAQYSHPDYRRVRPELLDEEDAPAGEEAEAPAKTSKASKAPSKEIVINQIR
ALSDFMNISTHRSGRRVIVLYPAEALNVPAANALLKSLEEPNANTVFILVSNSIDRLLPT
ILSRCHKFGLGLPDAGIALEWLHKQGIKDADVWLAQQGGAPLAAFDMAHSDLRADLDEFI
RFLSKPGTELSLKTADKMQKMEMPVVVGWLQRWLYDIFSYKQSGRIRYHPRYEQELKSLS
MQVDEPALQQFIKNCNERQAIASHPLSAKLFLEDMLLEYSALFGTI
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaacatcccctatatagctggcaagaagatgcctggcagcagatacaggctttg
ggacaacgcttgccccatgcctttttattgcatgggccgcaagggataggtaaaactgtg
tttgccgagcatctggcgcagtcactgctttgcgaaaacccatggcagggtgggcacgcc
tgccagcaatgtggttcttgtggctggtttgctcaatacagccatcccgactatcgccgc
gtcaggccagaactgctggacgaagaagatgcgccagctggtgaagaggctgaagctcct
gccaaaaccagcaaggccagcaaagcgccttccaaggaaatcgtcattaatcaaatccgc
gcgttgtcggatttcatgaatatttctacccaccgtagcggccggcgcgtcatcgttctg
tatcctgccgaggcgctgaatgtgcctgcggcaaacgctttgttgaaatccctggaagaa
cccaatgccaatacggtattcattctggtctcaaacagcatagacaggttgctgccaacc
atcttgtcgcgttgtcacaagtttggacttggcttgccggatgctggtattgcgctggaa
tggctgcataagcagggcatcaaggatgccgatgtctggttggctcaacagggcggagcg
cctttggcagcattcgacatggcacattcagacttgcgtgctgatctggatgaatttata
cggtttttgagtaaacctggtactgagttgagccttaaaactgccgacaagatgcagaaa
atggaaatgccagtcgtcgtcggctggctacaacgttggctctacgatatattttcctat
aaacaaagcggcagaatccggtatcatcctcgctatgagcaggagttgaagtcgttgtcc
atgcaggttgatgagccagccttgcaacaattcattaagaattgcaatgaaagacaggcg
attgccagtcaccctttgtcggccaaattatttttggaagatatgctgcttgaatattcc
gcattattcggcactatttga
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