Undibacterium sp. KW1: UNDKW_2924
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Entry
UNDKW_2924 CDS
T08678
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
und
Undibacterium sp. KW1
Brite
KEGG Orthology (KO) [BR:
und00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
und03016
]
UNDKW_2924 (truB)
Enzymes [BR:
und01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
UNDKW_2924 (truB)
Transfer RNA biogenesis [BR:
und03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UNDKW_2924 (truB)
Prokaryotic type
UNDKW_2924 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBB61197
UniProt:
A0A6N4T5M0
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Position
complement(3253133..3254035)
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AA seq
300 aa
AA seq
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MPVHGVLLLDKPVGFSSNDALIKAKRFLNAAKAGHTGTLDPFATGLLPLCFGEATKFSQD
LLEADKTYTTVVHLGVTTITGDTEGEVLEEKPVAVSIEQILHALQQFTGPIQQVPPMYSA
LKRDGKPLYEYARAGITLEREARSVTIHELELLAYEAPFLSLKVKCSKGTYVRVLGEDIG
AMLGCGAHLKELRRIGVGHLVLEKSITLEHLESLPEPERLALLAPVDALLSSFDPVYLTG
ELSRRFLHGQRLALNKEEVTLPIETGRVRVYRESDGQLLGSAQLQEYGILAPERLIATEH
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgtgcacggtgtattgctattggataagccggttggtttttccagtaatgacgcc
ctgatcaaggccaagcgttttttgaatgccgccaaagcgggacataccggcacgctcgat
ccgtttgctaccggcttgctacctctgtgctttggtgaagctaccaagttttcccaggat
ttactcgaagcggacaagacctacactacggtggtacaccttggcgtcacgacgataacc
ggggacacagaaggtgaagtgctggaagaaaagccggtagcggtcagcattgagcaaatc
ctgcatgctttacagcaattcactggcccgatacagcaagtgccgcccatgtattcagcg
ctcaaacgtgatggcaaacctttgtatgagtacgcacgcgctggtatcacgctggaacgt
gaagcgcgcagtgtcaccattcatgaactggagttgctggcttacgaagcgcctttcttg
agcctcaaggttaaatgcagtaagggtacttatgtgcgggtgctgggtgaggacatcggt
gcaatgctgggttgcggcgcacatctgaaggaattgcgccgtatcggtgtggggcatctg
gtattggagaaatccattactctggagcatctcgaaagcttgccagaaccagagcgtctg
gcattgcttgccccggttgatgccttgttgtccagctttgatcctgtttacctcacaggt
gaactgtcgcgccgcttcctgcacggccagcggctggcattaaataaagaagaagtcaca
ctgcccattgaaactggccgcgttcgcgtctatcgtgaatcagatgggcagttgctgggt
tctgcccagttgcaggaatacggcatactcgcgcccgagcgcctgattgccactgaacat
taa
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