Undibacterium sp. KW1: UNDKW_3210
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Entry
UNDKW_3210 CDS
T08678
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
und
Undibacterium sp. KW1
Pathway
und00040
Pentose and glucuronate interconversions
und01100
Metabolic pathways
und02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
und00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
UNDKW_3210
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UNDKW_3210
Enzymes [BR:
und01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
UNDKW_3210
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BBB61483
UniProt:
A0A6N4T6C2
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Position
3572377..3573747
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AA seq
456 aa
AA seq
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MNNKKLKLIAFAIIAASGSAANVFAADWPSGFSKCADEGGTCKVGDKALQVSFGLKDKWV
IKSLSGNVSCTAATFGVAATADTKEKCAVGPAGTPDTGGGSGSNDGSGSGTGTGTAPAGH
SGGFAGLVTGGGTVAAVTVTTAAQMQAAIDAYNGTGGLVIRYNGTFDFRTIPDACTQWKK
AKGAIVEIKNKGNITIEGSNGSAANFGIAVKGGATNVIIRNMTIGLLPGSIDAIGIEGQS
GKFPGYVWIDHNTLFSSLAECPGAGDLEFDGLVDNKAGAHHITYSYNYIHDHHKVGLIGS
SDSDASDRYITFHHNYYKNVGSRLPLQRGGYTHIYNNLYSDIKTSGINVRMQGYSLIESN
YFENSQNPVTSRDSDVLGYWELRNNNIKTPADFNTYGINWVASDSKPSRDATDWVTTSHL
PVGIPYSYTPDAPACLKQKLPAVAGAGTSLAKLSCK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaagaaattgaaattgatcgcctttgccattattgcagcgtctggcagtgca
gctaatgtttttgcagcagactggccctcgggcttttctaaatgcgccgatgaaggcggc
acctgcaaagtaggcgacaaagcactgcaggtatcatttggattgaaggataaatgggtc
atcaaatccctgtcgggcaatgtcagttgtacagccgccacctttggcgtggcagcaacc
gccgacaccaaagaaaaatgtgccgttggcccagctggcacgccagatactggcggaggc
agtggctcaaatgatggctcaggttcaggcactggcacaggaaccgcgccagccggacac
agtggcggctttgccgggctggtcactggtggtggtacagttgccgctgtaacagtcacg
actgcggcacaaatgcaggcagcaattgatgcctacaacggcactggtggcctggtgata
cgctataacggcacgtttgatttccgcactattcctgatgcatgcacacaatggaaaaaa
gccaaaggtgcgatagtcgaaatcaagaataagggcaatatcacgatagaaggcagcaat
ggctcggcggctaattttggaatcgcggtcaaaggtggcgcgaccaatgtcattatccgc
aacatgaccataggcttactgcctggctctattgatgccataggcattgaaggccagagt
ggcaaattcccaggctatgtctggatagaccacaacaccctgttcagctcacttgccgaa
tgcccgggtgcgggtgacctggagtttgatggcctggtggataacaaggcaggtgcgcat
cacatcacctactcttataactacatccatgatcatcacaaagtaggcctgatcggttcc
agcgacagcgatgcaagtgaccgctacatcactttccatcataattattataaaaacgta
ggctcacgcctgccactgcagcgcggtggttatacccatatctataataatctgtatagc
gatatcaaaacctcgggcatcaatgtgcgcatgcagggctattccctgatcgaaagcaat
tacttcgaaaactcacaaaaccccgtcacctcacgcgacagtgatgtgcttggctattgg
gaattgcgcaacaataatatcaagacgcctgccgacttcaacacttatggcatcaattgg
gtagcgagcgattccaagcccagccgtgatgcaacagactgggtaacgacatcgcattta
ccagttggcataccttatagctatacaccagatgcacctgcctgtctgaagcaaaaactg
cctgcggtcgcgggtgctggcacttctctggcaaaactgagttgtaaataa
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