Undibacterium sp. KW1: UNDKW_3283
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Entry
UNDKW_3283 CDS
T08678
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
und
Undibacterium sp. KW1
Pathway
und03030
DNA replication
und03430
Mismatch repair
und03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
und00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UNDKW_3283 (dnaE)
03430 Mismatch repair
UNDKW_3283 (dnaE)
03440 Homologous recombination
UNDKW_3283 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
und03032
]
UNDKW_3283 (dnaE)
03400 DNA repair and recombination proteins [BR:
und03400
]
UNDKW_3283 (dnaE)
Enzymes [BR:
und01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UNDKW_3283 (dnaE)
DNA replication proteins [BR:
und03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UNDKW_3283 (dnaE)
DNA repair and recombination proteins [BR:
und03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UNDKW_3283 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Mrr_cat
Kinetochor_Ybp2
Motif
Other DBs
NCBI-ProteinID:
BBB61556
LinkDB
All DBs
Position
complement(3679131..3682649)
Genome browser
AA seq
1172 aa
AA seq
DB search
MTTELITSPEATTEVVVSKPYEPAFVHLRIHSEYSIVDGLVRIDDVIKAAVKDKQPAMAI
TDLANLFAMVKFYKAARGKGMKPIAGCDVWISNDVDRDKPSRLLLLVKNKLGYLQLCELL
AQAWLTNQHKGRAEIRYEWLQSIFEEGKGGGLIAISGAHFGDVGVAIDNGNLDLAEQNAR
RWSSIFPNHFYIEIQRAGQANMDNHVRAAVALAGRLKLPVVATHPVQFISKDDYTAHEAR
VCIAEGDMLANGRRVRRFNEQQCFKTQAEMAELFADLPAALRNSVEIAKRCNLMLELGKP
KLPDFPTPEGMTINDFLEHESRRGLEFRLNQIFPNEEKREKERARYEARLKFETDTIIKM
GFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVAYSLLITDLDPLQYNLLFERFLNPE
RVSMPDFDIDFCQEGRDKVIQYVKDRYGKEAVSQIATFGTMAAKGAIRDIGRVLDFGYMF
CDGVSKLIPFKPGKQVTIAEAIVEEPLLAERQENEEEVKTLLDLAQQVEGITRNIGMHAG
GVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIK
MMDPAMADFDLAKLPLDDRASYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALV
ALYRPGPMDLIPDFCKRKHGEKFDYPDPRTEGILSETYGIMVYQEQVMQMAQVVGGYSLG
GADLLRRAMGKKKAEEMAEHRQIFRDGAAKDGLPQEKADEIFDLMEKFAGYGFNKSHAAA
YALLSYHTAYLKAHHAAAFMAANMSLAMDDTDKVKILVEDAIDICKLKMLPPDINLSDYR
FMPVAEPGKKSSQIRYGMGAVKGSGQNAIESIITARKEGGPFKDLFDFCKRVDKRQVNRR
TVESLIRAGAMDCLGKDRGVLLATVDFAMEAAMQAEAAANQVSLFGDDDDLIAPPDYLDV
PPWTDKKRLTEEKLALGFYLSGHLFDSYAPEVRQFIKTTLAKLEPSRDLRLICGIITGVR
TQMTQRGKLLIVSLDDGTAVVEVTVYSELMEEFKSLFKEDEFLAVLGKVSEDRFSGGLRI
SAEKVMDIGRARVQFSQGLRLTLTSTADTKKLQEMLKPHLNADGCPVLIRYQNANASAEL
YLSDQWRVNPDDVLRQNLGEWLSMKNVKIEYA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgactacagaattaattacctcccctgaagcgaccaccgaagttgtcgtcagcaagccc
tacgagcctgcctttgtccatctgcgcatccactctgaatattcgatagtcgatggcctg
gtgcgtattgatgatgttatcaaggcagcagtcaaagacaaacagcctgcaatggcaatt
actgacctggcgaatttgttcgccatggtgaaattttataaagccgcacgcggcaagggc
atgaagcctatcgccggttgcgatgtgtggatcagcaatgatgtcgatcgtgacaaacca
tcccggttgctgttgctggtcaagaacaagctggggtatttgcagttatgcgaattgctg
gcacaggcctggctgacgaaccagcacaaggggcgtgcagaaatccgctatgaatggttg
cagagtatttttgaagaaggtaagggtggtggcctgatcgccatctctggcgcgcatttt
ggtgatgtcggcgttgctatcgacaatggcaatcttgatttggcagaacaaaacgccagg
cgctggtccagtattttccccaatcatttttatatagaaatacaaagagcaggccaggcg
aacatggacaatcatgtgcgtgctgccgtggccctggctggcaggctcaaattgccggtg
gtggcaacccatcctgtgcaattcatcagcaaagacgattacaccgcccatgaagcacgc
gtctgtattgccgagggcgatatgctcgccaatggccgccgcgtgcgcaggttcaatgaa
cagcaatgcttcaagacccaggccgagatggcagaattgtttgccgacttgccagccgca
ctgcgcaattcagttgaaatcgccaagcgctgtaacctgatgctggaactgggtaagccg
aagctgccggattttcctacgcctgagggcatgaccatcaatgactttttggagcatgaa
tcccggcgtggtctcgagtttcgcctcaatcaaattttcccgaatgaagaaaagcgcgag
aaagagcgtgcccgttatgaggcgcgcctgaagtttgaaaccgacaccattatcaagatg
ggtttcccgggttacttcctcatcgttgctgactttatccagtgggccaagaacaatggc
gtgccggtagggccgggccgtggttctggtgccggttccctggttgcgtattcattgctg
atcaccgatcttgatcctttgcagtacaacctgctgttcgagcgtttcctgaacccggag
cgggtatccatgcccgactttgatattgacttttgccaggaaggccgcgacaaggttatt
cagtacgtgaaagaccgttatggcaaagaagcggtgtcgcagattgccaccttcggtacc
atggctgccaagggcgcgatacgcgacatcggccgcgtgctggactttggctacatgttc
tgcgatggcgtctccaaactgatcccgttcaaaccgggcaaacaagtcacgatagccgag
gcgattgtagaagaacccttgctggctgagcgtcaggaaaacgaagaagaagtcaaaacc
ctgctcgacctggcgcaacaggtagaaggcatcacccgtaatatcggtatgcatgccggt
ggtgtattgattgcaccaggcaagctcacagatttttgcccgttgtatacccagggcggt
gattctggagtggtgtcgcaatacgataaagacgacgtcgaggctgtgggcctggtcaag
ttcgactttttgggcttgaccaccttgaccattctcgacagggcagtgcgctatatcaag
atgatggacccggccatggccgactttgatctggccaaattgccactggatgacagggcg
tcttatgatttgctgaccaaggccaagaccgtggctgtgttccagctggaaagccgcggc
atgcaaggcatgctgaaagatgcgcgtcctgaccgctttgaagacattatcgcgctggtg
gctttgtaccgccctggccctatggacctgatcccggatttctgcaaacgcaagcacggt
gagaaattcgattatcctgatccccgtaccgaaggcattttgtctgaaacctacggcatc
atggtgtatcaggagcaggttatgcagatggcccaggtggtcggtggctactcactcggc
ggtgccgatttgctgcgccgtgccatgggtaagaaaaaagcagaagagatggccgagcat
cgccagattttccgtgacggtgcagccaaggatggtttgccgcaagaaaaagccgacgag
attttcgatttgatggaaaaattcgcgggctatggttttaataaatcccatgctgccgcg
tatgccttgctgtcttatcacaccgcttatctgaaggcgcatcatgccgctgctttcatg
gcagccaatatgtcgctggccatggatgataccgacaaggtcaaaatcctggtcgaagat
gcgattgatatctgcaagctcaaaatgctgccgccagatatcaatctgtccgattatcgt
ttcatgccagttgccgaacctggcaaaaaatccagccagatacgctatggcatgggcgcc
gtcaaaggctcgggccagaatgcgatagaaagcatcatcactgcgagaaaagaaggcgga
ccatttaaggatttgtttgatttctgtaaacgcgtcgataaacggcaggtcaaccgtcga
acggtagagtcactgatacgtgccggtgccatggattgcctgggcaaagaccgtggcgtc
ttgctggctaccgtcgattttgcaatggaagcagcgatgcaggcagaagccgcagcaaac
caggtcagcctgtttggtgatgacgatgatttgatcgcgccaccagattacctggatgta
ccgccgtggacagacaagaagcgcctgaccgaagaaaaactggcgctgggcttttacctg
tccggtcatctgtttgattcttatgcgccagaagtgcgccagttcatcaagaccactctt
gccaagctggaaccttcacgcgacttgcgcctgatttgcggcatcattaccggtgtgcgc
acccagatgacacagcgcggcaagctgctcatcgtcagccttgatgatggcactgccgtg
gttgaggtgacggtgtatagcgaactcatggaagagttcaaatccttgttcaaggaggat
gaattcctcgctgttctgggcaaagtgtcggaagacaggttctctggcggcttgcgtatc
tcggctgaaaaagtcatggacataggccgtgcccgcgtgcagttctcgcaaggtttgcgt
ctgacgctgacatcgactgcagacacgaaaaaactgcaagagatgctgaaaccacatttg
aacgccgatggttgcccggtattgatacgttatcagaacgccaatgccagtgctgagctg
tatctgtctgaccagtggcgggtgaacccggatgatgtcttgcgtcagaacctgggtgaa
tggctatccatgaaaaacgtcaaaattgaatacgcctga
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