Undibacterium sp. KW1: UNDKW_3504
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Entry
UNDKW_3504 CDS
T08678
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
und
Undibacterium sp. KW1
Brite
KEGG Orthology (KO) [BR:
und00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
und03032
]
UNDKW_3504 (gyrA)
03400 DNA repair and recombination proteins [BR:
und03400
]
UNDKW_3504 (gyrA)
Enzymes [BR:
und01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UNDKW_3504 (gyrA)
DNA replication proteins [BR:
und03032
]
Prokaryotic type
DNA Topoisomerases
UNDKW_3504 (gyrA)
DNA repair and recombination proteins [BR:
und03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UNDKW_3504 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BBB61777
UniProt:
A0A6N4T7A1
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Position
complement(3921912..3924563)
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AA seq
883 aa
AA seq
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MDQFAKETLPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVYN
RPFVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDNAAAM
RYTECRLDKIANEILADIEKETVDFVPNYDGKEKEPSVLPTRIPNLLINGASGIAVGMAT
NIPPHNITEIINGALHVLRNSDCTIDELIEIIPAPDFPTGGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEFGKDSRTALIVDELPYQVNKKSLLERIAELVRDKKLDGISDIRDESDKSG
MRVVIELKRGEVPDVVLNNLYKQTQLQDTFGMNMVALVNGQPKLLNLKEMLSCFLSHRRE
VVTRRTLFELRKARERGHVLEGLAVALANIDDFIAIIRAAPTPPIAKQELMTRAWDSSMV
REMLVRTAADNSGGIDSFRPENLPKHYGIQPDGLYKLSDDQAQEILQMRLQRLTGLEQDK
IVNEYKDVMAEIADLLDILSKPERVTVIITDELTLARNEYGEGNKDVRRSEITHNATDLG
TEDLITPQDMVVTLSHTGYMKSQPLSEYRAQKRGGRGKQATATKDDDWIEQLFVANTHDY
ILCFSNRGRMYWLKVWEVPQGSRTSRGKPIVNMFPLQDGEKITVILPLSGDNRTFPEDHY
VFMSTSLGTVKKTPLTDFSNPRKAGIIAVDLDEGDFLIGAALTDGKHDVMLFSDSGKAVR
FDENDVRPMGRTARGVRGMNLDEGQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH
GRGTKGMIAIQTSERNGKVVAATLVETTDEIMLITTGGILIRTRVSEIREMGRATQGVTL
IAVEDGTKLSGLQRIVETDADVDTGDNGAGEAEGSAPEADAAE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgcaaaagaaacactcccgatttcccttgaagaagaaatgcgcaaaagc
tatctcgattacgcgatgagcgttatcgtaggtcgcgctttgccggatgtgcgtgatggc
ttaaagcctgtgcatcgtcgcgtattgttcgcgatgcacgaaatgaacaatgtctataac
cgccccttcgttaaatgtgcgcgtgtggtgggtgaagtcatgggtaagtaccatccccat
ggcgatgcctccatttacgacacgctggtgcgtatggcgcaagacttttccctgcgttat
accctggtcgatggtcagggtaactttggttccatcgatggcgacaatgctgcggcgatg
cgttataccgagtgccgcctggacaagatcgccaatgaaattctggccgatatcgaaaaa
gaaacagtcgatttcgttcccaactatgacggcaaagagaaagagccttcggttctgcct
acccgtatcccgaatctgctgatcaatggcgcatccggtattgcagtgggtatggcgacg
aatatcccgccacataatattaccgagatcatcaatggtgctctgcatgtcttgcgcaat
agtgattgcacgatcgatgaactgatcgagatcatccctgcacctgacttccctaccggc
ggcattatctatggcgtgtctggtgtgcgcgatggttaccgcactggccgtggccgtgtg
gtcatgcgcgccaagacccactttgaagagtttggcaaagacagccgtactgcgctgatc
gttgatgagctgccttaccaggtcaataaaaaatccctgctggaacgtatcgctgaactg
gtacgcgacaaaaagctcgatggtatttctgatatccgcgatgaatccgataaatcgggc
atgcgcgtggttatcgagctcaagcgtggcgaagtacctgatgtagtactgaataatctg
tacaagcagacgcagttgcaagatactttcggcatgaacatggtggcgctggtgaatggt
cagcctaaattgctgaacttgaaggaaatgctgtcctgcttcttgtcgcatcgtcgtgaa
gtagtgacgcgccgcaccctgtttgaactgcgcaaggcacgtgagcgtggccatgtgctg
gaaggcctggctgttgcgctggcgaatatcgatgactttatcgccatcatccgcgcagcg
cctacgccaccgatcgcgaaacaggaattgatgacacgcgcctgggatagttccatggtg
cgtgagatgctggtgcgtactgctgctgacaattctggtggtattgattctttccgccct
gagaatttgcctaaacactacggcatacagccagatggtctgtataaattgtctgacgac
caggcgcaagaaatcctgcaaatgcgtttgcaacgcctgactggtctggaacaagacaag
atcgtcaatgaatacaaagacgtcatggccgagattgccgatttgctggacatcttgtcc
aagccagaacgcgtcaccgtcatcatcactgatgaactgaccctggcccgcaatgaatac
ggcgaaggcaataaagacgtacgccgttcagaaatcacccataacgccacagacctgggc
acagaagacctgatcacgccgcaagacatggtcgtgaccctgtcgcacactggttatatg
aagtcgcaacctttgtctgaataccgcgcgcaaaaacgcggtggccgtggcaagcaggcg
acagcgaccaaggatgatgactggatcgagcaactcttcgtggctaatacccatgattac
atcctgtgcttcagtaaccgtggccgcatgtactggctgaaggtctgggaagtgccacaa
ggctcgcgtacttcacgcggcaagcctatcgtcaacatgttcccattgcaggacggtgaa
aaaatcaccgtcatcctgcctttgtctggcgataaccgtactttccctgaagaccattat
gtcttcatgtccaccagcctgggcacggtcaagaaaacacctttgactgatttcagcaat
ccacgtaaggccggcattattgcggttgatctggacgagggcgatttccttatcggcgcg
gcactgaccgatggcaagcatgatgtcatgctgttctctgattccggcaaagcagtacgc
tttgatgaaaacgatgtgcgtcctatgggccgcacagcccgtggtgtacgcggcatgaac
ctggatgaaggccagcaggttattgccttgctggtggctgaaaatgaacagcaatctgtg
ttgactgcgactgaaaacggctttgggaaacgtacacctatcactgaatacacccgtcat
ggccgtggtaccaagggcatgatcgcgatccagacttccgagcgtaacggcaaggttgtg
gctgcaacactggttgagacaacggatgaaatcatgttgatcactaccggtggcatcctg
atacgtacccgtgtttccgaaatccgtgaaatgggccgtgcaactcagggcgtgaccctg
attgcggttgaagacggtaccaaattgtctggcttgcaacgcattgtggaaacagatgcc
gatgtagatacaggcgataacggtgctggtgaagcagaaggcagcgcaccagaagccgac
gcagcggagtaa
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