Undibacterium sp. KW1: UNDKW_3554
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Entry
UNDKW_3554 CDS
T08678
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
und
Undibacterium sp. KW1
Brite
KEGG Orthology (KO) [BR:
und00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
und03000
]
UNDKW_3554
Transcription factors [BR:
und03000
]
Prokaryotic type
Helix-turn-helix
LysR family
UNDKW_3554
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
HTH_20
MarR_2
HTH_23
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
BBB61827
UniProt:
A0A6N4T7E9
LinkDB
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Position
3999448..4000344
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AA seq
298 aa
AA seq
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MNITFRQLQIFIRLAELRSISAVARACHVTQPTVSMQLKEMTDTIGMPLYEVIGKKLYLT
KAGEELASTARSLAHEWGSFEQQIAAMKGLTEGSLRVAVVSTAKYFIPRMLGDFCREFPE
IDIALEVQNRDGVVERLRNNLDDIYIMSTPPKDIDVVKQVFLPNPLVVVAPLQHPLAGKK
RLQFAQLLNERFILRERGSGTRLACEHYFSENKIAPVVRLELGSNEAIKQAVAADMGLTI
LSRHALGDHLTDQNLSVLDVQDFPIMSNWYIVHLQGKRLSPIASNFLGYLSQHAQDKV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcacctttagacaattgcagattttcatacgcctggcagagctgcgcagcatt
agtgctgttgcacgcgcctgtcacgtgacacaacccacggtgtccatgcaactgaaagaa
atgacagacaccatcggtatgcccctttatgaagtgataggcaaaaaactctacctgacc
aaggcaggcgaagagttggcgagtaccgcccgcagcctggcgcatgaatggggcagcttt
gaacagcaaatcgcagccatgaaaggtttgaccgagggcagcctgcgcgtggccgtggtc
agcaccgcgaaatactttatcccgcgcatgctgggcgatttttgcagggaattcccggaa
attgatattgcgctcgaagtgcaaaaccgtgacggcgtcgtcgagcgcctgagaaacaat
ttggacgatatctacatcatgtccacaccccctaaggacatcgacgtcgtcaaacaagta
ttcttgccaaatccactggtcgtggttgcacccttgcagcatcctctggcgggaaaaaaa
cggctgcaatttgcccagttattaaatgagcgctttatcctgcgtgagcggggctctggc
accaggctggcgtgtgaacactactttagtgagaataagatcgcacccgtggtaagactg
gaactcggcagcaacgaggcgatcaaacaagcagttgctgccgacatggggctgaccatc
ctgtcacgccatgcgctgggtgatcatttgacagatcaaaacctgagcgttctggacgtc
caggattttcccatcatgtctaactggtatatcgttcacctgcaaggcaaacgcctgtcc
cccattgccagcaattttcttggctacctgagccagcacgcacaagacaaggtctag
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