Undibacterium sp. KW1: UNDKW_4528
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Entry
UNDKW_4528 CDS
T08678
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
und
Undibacterium sp. KW1
Pathway
und03030
DNA replication
und03410
Base excision repair
und03420
Nucleotide excision repair
und03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
und00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UNDKW_4528 (polA)
03410 Base excision repair
UNDKW_4528 (polA)
03420 Nucleotide excision repair
UNDKW_4528 (polA)
03440 Homologous recombination
UNDKW_4528 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
und03032
]
UNDKW_4528 (polA)
03400 DNA repair and recombination proteins [BR:
und03400
]
UNDKW_4528 (polA)
Enzymes [BR:
und01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UNDKW_4528 (polA)
DNA replication proteins [BR:
und03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
UNDKW_4528 (polA)
DNA repair and recombination proteins [BR:
und03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
UNDKW_4528 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UNDKW_4528 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BBB62801
LinkDB
All DBs
Position
complement(5033669..5036437)
Genome browser
AA seq
922 aa
AA seq
DB search
MQNTLLLVDGSSYLYRAFHALPDLRNAQGEPTGAIHGMINMLRRLRTDYPAAYIACVFDA
KGKTFRDDLYPEYKAQRPSMPDDLRLQIEPIHVAVKAMGWPILMVEGVEADDVIGTLAVE
ATKLGMNTIVSTGDKDLAQLVNANVTLINTMSNEKLDEPGVLAKFGVPPDRIIDYLTLIG
DTVDNVPGVAKCGPKTAVKWLTEYDSLDGVIANADKIKGVVGDNLRSALEWLPQGRVLIT
VKTDCDLTGHYTSIQDSLVAKQEDKTELVGFASRWGFKTWLRELTGDATAGATPLPAAKV
QAANPAQGGLFNEDAQTQASVVTNYETVLTEAALDEWLARINAAKLTSVDTETTSLEPMT
AQLVGVSLCCEVGHAAYIPVAHNYPGAPEQLSLAVVLGKMKAWLEDDSKPKVGQNLKYDS
HIFANQGVNLRGIAHDTLLESYVFESHKSHDMDSLAMRHLGKKTISFEEVCGKGASQIGF
NQVDLERATAYAAEDADITLQLHLAMWPEIEPDANLLRVYHDIELPTSVVLQKIERNGVH
INKDLLEAQSHEIGIRLLELEQKAYELAEQPFNLNSPKQLGEIFFGKLGLPVVKKTPSGA
PSTDEEVLQKLAEDYPLPKVLLEYRGLAKLKSTYTDKLPKMVNASTGRVHTNYAQAVAVT
GRLSSNDPNLQNIPVRTAEGRRIREAFVAGPGNVIISADYSQIELRIMAHISGDASLLAA
FANGEDIHRATASEIFAVPLTEVTSEHRRYAKVINFGLIYGMSAFGLAGNLGIERSAAQS
YIDKYFQRYPGVAQYMADTRTKAKAHGYVETVFGRRLWLAEINSPNGPRRAGAERAAINA
PMQGTAADLIKLAMIAVQNWLEKDKLQSKMIMQVHDELVLEVPQAELELVKQKLPELMAN
VAKLDVPLLAEVGVGGNWEEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatactctcttgttagttgatggctctagctatctgtaccgcgccttccatgct
ctgcccgacctgcgcaatgcacaaggagaaccgactggcgccatacacggcatgatcaat
atgttacgccgtttgcgtacggattacccggcagcatacatcgcctgtgtgtttgatgcc
aaaggcaaaaccttccgtgacgacctctatcccgagtacaaggctcagcgcccctccatg
ccagacgacctgcgcctgcagatagaacctatccacgtcgccgtcaaggccatgggctgg
cctatcctcatggtcgaaggggtagaggcagatgacgtcatcggcacgctggcagtagaa
gccaccaagctgggcatgaacaccatcgtctctaccggtgacaaggacttggcacaactg
gtcaatgccaatgtcaccctgatcaacaccatgagcaatgaaaagctcgatgaacccggt
gtactggccaaatttggcgtgccgcccgaccgcatcatcgattacctgacactgataggt
gacaccgtcgataacgtccctggtgttgccaaatgcggccccaaaactgccgtcaaatgg
ctgacagaatacgatagcctggatggcgtcatcgccaacgccgacaagatcaagggcgtg
gtcggcgacaacctgcgcagtgcgctggaatggctgccacaaggccgtgtgctgatcacc
gtcaaaaccgattgcgacctgaccgggcattacacatcgatacaggacagtctggtcgcg
aaacaagaagacaagacagaactggtcggctttgccagccgctggggcttcaagacctgg
ttgcgtgagttgacaggtgatgccaccgcaggtgcaacgccattgcctgctgccaaggtg
caagcggctaatcctgcacaaggcggcctgttcaatgaagatgcgcaaacccaggccagc
gttgtgaccaactacgaaaccgtattgacagaagccgccctcgacgaatggttggcccgc
atcaatgccgccaaactgacctcggtggataccgaaaccacctcgctcgaaccaatgact
gcgcaactcgtcggcgtctcgctgtgctgcgaagtcggccatgcggcgtacatcccggtt
gcccacaactaccctggtgcgcctgagcaattatcgctggctgtggtgctgggcaagatg
aaagcctggctggaagacgacagcaaacccaaggtcggccagaacctcaaatacgacagc
cacatcttcgccaatcagggcgtgaacctgcgcggcatcgcgcatgacaccctgcttgaa
tcctatgtctttgaatcgcataaatcgcatgacatggacagcctggccatgcgccacctc
ggcaagaaaaccatcagctttgaagaagtctgcggcaagggtgcaagccagataggcttt
aaccaggtcgatctggaacgtgctactgcctatgctgcagaagatgccgacatcaccctg
caactgcatctggccatgtggccagagatagagccggacgccaacctgctgcgcgtctat
cacgacatagaattgcccacctcggttgtcttgcaaaagatagagcgcaacggcgtacac
atcaataaagacctgctcgaagcgcagtcgcatgaaatcggcatacgcctgctggaactc
gaacaaaaggcctacgagctggcagagcagcctttcaatttgaactcacccaaacaactg
ggcgagattttctttggcaagctgggcctgcccgtcgtcaagaaaacaccttccggcgca
ccatcgaccgatgaagaagtcttgcaaaaactggccgaggattatcccctgcccaaggtc
ttgcttgaataccgtggcctggccaaactcaaatcgacttacactgacaaattgcccaag
atggtcaacgccagcacaggccgcgtccacaccaattatgcgcaagccgtggctgtcact
ggccgcctgtcatcgaatgaccccaacctgcaaaacatccccgtgcgcactgccgaaggt
cgccgcatacgtgaggcctttgtcgccgggccaggcaatgtcatcatctctgccgattat
tcacaaatcgaattgcgcatcatggctcacatctctggcgacgccagcctgctggctgcc
tttgccaatggcgaagatatccatcgcgctaccgcctcagagatttttgccgtgccgctg
actgaagtaacaagcgaacatcgccgctacgccaaggtcatcaactttggcctcatctat
ggtatgagcgcttttggcctggcaggcaacctcggcatagaacgcagcgcagcacaaagc
tatattgacaaatacttccagcgctaccccggcgtcgcccaatacatggccgacacccgc
accaaggccaaggcccacggctatgtagaaaccgtcttcggccgccgcctgtggctggcc
gagatcaattcccccaacggcccccgccgcgccggcgctgaacgcgcagcgatcaacgcc
cccatgcagggcacagcagccgacctcatcaaactcgccatgatcgccgtacaaaactgg
ctggaaaaagacaagctgcaatcaaaaatgatcatgcaggtgcacgatgaactggtgctt
gaagtgccgcaagcggagctggaactggtcaaacaaaaattgcctgagctgatggcgaat
gtggcgaaactggatgtgcctttgcttgccgaagtcggcgtgggcgggaattgggaagag
gcgcattga
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