Undibacterium sp. KW1: UNDKW_4610
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Entry
UNDKW_4610 CDS
T08678
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
und
Undibacterium sp. KW1
Pathway
und00521
Streptomycin biosynthesis
und00523
Polyketide sugar unit biosynthesis
und00525
Acarbose and validamycin biosynthesis
und00541
Biosynthesis of various nucleotide sugars
und01055
Biosynthesis of vancomycin group antibiotics
und01100
Metabolic pathways
und01110
Biosynthesis of secondary metabolites
und01250
Biosynthesis of nucleotide sugars
Module
und_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
und00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
UNDKW_4610 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
UNDKW_4610 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
UNDKW_4610 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
UNDKW_4610 (rmlB)
00525 Acarbose and validamycin biosynthesis
UNDKW_4610 (rmlB)
Enzymes [BR:
und01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
UNDKW_4610 (rmlB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
BBB62883
UniProt:
A0A6N4TAC6
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Position
5117442..5118524
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AA seq
360 aa
AA seq
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MRHDFCHRGAGFIGANFVLDWLAQSDESVLNYDKLTYAGNLNNLASLNNDARHVFVKGDI
IDSAHLCGLFFEYQPRAIVHFAAESHVDRSIHGPAAFVTTNVNGTFNLLEAARTYWQSLE
GEDKANFRFLHISTDEVYGTLATDDAAFSETTAYAPNSPYSATKAASDHLVRAYHHTYGL
PVLTTNCSNNYGPYHFPEKLIPLIIANARAGKDLPVYGDGLQVRDWLYVKDHCAAIRRVL
EAGKPGETYNVGGWNEQTNLSVVHTLCELLDELQPKAQGSYKDQIRHVTDRPGHDRRYAI
DARKIEKELGWKPQETFTTGLRKTVEWYLDNDEWTRQVQSGEYLKWVALQYEEDEDGDVV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcatgatttttgtcacaggggcgcaggtttcatcggtgccaattttgttctggac
tggctggcccagtcagatgagtccgtactcaattacgacaaactgacctatgccggtaat
ttgaacaacctggccagcctcaataacgacgcacgtcacgtatttgtcaaaggtgacatc
atcgacagtgcgcatttatgcggcttgttttttgaatatcagcccagggctatcgtccac
ttcgcagcagaaagccatgtagatcgctccatccatggcccggcagcttttgtgacgacc
aatgtcaacggcaccttcaacctgctggaagcggcacgcacttactggcaaagcctggaa
ggcgaagacaaggccaacttccgcttcctgcatatttctactgatgaagtgtatggcacg
ctggctacagatgatgcggcattcagcgaaaccacggcttacgcaccgaacagcccttat
tcagccaccaaggcagcgtccgaccatctggtacgggcatatcaccatacctatggtttg
ccagtactgacaaccaattgctcaaacaattacggcccttaccatttcccggaaaaactg
ataccgctgatcatagccaatgcccgcgccggcaaagatttgccggtgtatggcgatggt
ttgcaagtgcgtgactggctgtatgtgaaggaccattgcgccgcaatccgccgcgtgctc
gaagctggcaaacccggagaaacctataacgtcggtggctggaatgaacaaaccaatttg
agcgtggtacacaccctgtgtgaattgctcgacgagctgcaacccaaggcgcaaggcagc
tataaagaccagatcaggcatgtgactgacagaccaggccatgaccgtcgctatgcgatt
gatgcccgcaagatagaaaaagaactgggctggaagccgcaagagactttcactaccggc
ctcagaaaaaccgtggaatggtatctggacaatgatgaatggaccaggcaggtacagtct
ggcgaatacctgaagtgggtagcgctgcaatatgaagaagatgaagacggggacgtagta
tga
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