Undibacterium sp. KW1: UNDKW_4788
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Entry
UNDKW_4788 CDS
T08678
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
und
Undibacterium sp. KW1
Pathway
und03420
Nucleotide excision repair
und03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
und00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UNDKW_4788
03430 Mismatch repair
UNDKW_4788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
und03400
]
UNDKW_4788
Enzymes [BR:
und01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UNDKW_4788
DNA repair and recombination proteins [BR:
und03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UNDKW_4788
MMR (mismatch excision repair)
Other MMR factors
UNDKW_4788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBB63061
UniProt:
A0A6N4TBI9
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Position
complement(5324095..5326386)
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AA seq
763 aa
AA seq
DB search
MQNLLHNLNPEQLAAVTLPAQSALILAGAGSGKTRVLTTRIAWLIQTGQVSPGGILAVTF
TNKAAKEMLTRLSAMLPINTRGMWIGTFHGLCNRLLRAHHRDAGLPSTFQILDSGDQLSF
IKRLLKANNIDDEKFPPKTLMYFINGAKDQGLRAAQVDAYDDFNRKLVGLYDLYDTQCQR
EGVVDFAELLLRTYELLSRNQPLREHYQDRFRHILVDEFQDTNDLQYKWLKLMAGEGGKK
GGAVFAVGDDDQSIYAFRGANVGNMSAFEREFQVQNLIKLEQNYRSHGHILDSANVLIEH
NSKRLGKNLRTDAGHGEPVRIMESSSDIQEANWIIEEAKNLIREGSLRSEIAILYRSNAQ
SRVIEHALFTANTPYRVYGGQRFFERAEIKHAIAYLQLMDNPHNDSAFLRVVNFPTRGIG
ARSLEQLQDVARQQNVSMYAAVPYVAGKAGSSLANFVKLIEGARFETQNLPLPEMVKIVL
EVSSLLTHYQTEKEGADRIENLEQLVSAATLFVSEEGFNKEAPAFAGPASSAAVLLQSEN
GDQIIDADAALPTVMSPLSAFLSHASLEAGDNQAQAGQDAMQLMTVHSAKGLEFDAVFIT
GLEEGLFPHENSTQEDSGVEEERRLMYVAITRARKRLYLSFSQTRMLHGQTRYNMRSRFL
DELPEESLKWLAPRVQPTWFGNKKSAWDEAPDDAANRIAQTFKKSNDSMTWRIGQNVEHA
KFGEGVIVNLNGGGGSGSLRAQINFGKFGMKELDLSIAKLEKI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatttactccataacttaaatcccgaacaacttgctgccgtgaccttgccggcg
cagtctgccctgattttggctggtgccggttctggcaagacacgtgtgctgactacccgc
atcgcctggctgatacagactggccaggtgtcgcccggtggtattttagccgtgactttt
accaacaaggccgccaaggagatgctgacgcgtttgtctgccatgttgccgattaataca
cgtggcatgtggataggtactttccatggcctgtgtaaccgccttttgcgcgcacatcac
cgcgatgcaggtttgccatcgactttccagatacttgattctggcgaccagttatccttc
atcaagcgtttgttgaaggccaataatatcgatgatgaaaaattcccacccaagactttg
atgtatttcatcaacggtgccaaggaccagggtttgcgtgctgcccaggtcgatgcctat
gatgatttcaaccgcaagctggttggcttgtatgatctgtatgacacgcagtgccagcgc
gaaggtgtggttgattttgctgaactcctgttgcgcacctacgaattgctgagccgtaac
cagccgttacgtgagcattatcaggacaggtttcgccacatcctcgtcgatgagttccag
gataccaatgacctgcaatacaagtggctgaagctgatggcgggcgagggtggtaaaaaa
ggtggcgcggtgtttgccgtcggtgatgatgaccagagtatctatgccttccgtggtgcc
aatgtcggcaatatgtctgcttttgagcgtgaattccaggtgcagaacctgatcaagctg
gagcagaattatcgctcccatggtcacatcctcgatagtgctaacgtgcttatcgagcac
aatagcaaacgactcggcaagaatttgcgtaccgatgccggtcatggtgaaccagtacgc
atcatggaatccagtagcgatatccaggaagccaactggatcatagaagaggcaaaaaat
ctgatacgtgaaggttctctgcgtagcgagattgcgatactgtatcgctcgaatgcgcaa
tcgcgggtcattgaacatgcgctgttcacggcaaataccccttaccgcgtttatggcggc
cagcgctttttcgagcgcgccgagatcaaacatgcgatcgcctatctgcaattgatggac
aacccgcataatgattctgcctttttgcgcgtggtgaacttccctacccgtggcataggt
gctcgctcgctcgagcaattgcaggatgtcgccaggcagcaaaatgtttccatgtatgct
gcagtaccttacgtggctggcaaggcgggttcttctctggcgaacttcgtcaagctcata
gaaggtgcccgttttgaaacccagaacctgcctttgcccgagatggtcaagatcgtgctg
gaagtcagcagcctgctgacacattaccagactgaaaaagaaggtgcagaccgtatagaa
aacctggagcagcttgttagcgctgccaccctgtttgtgtcggaagaaggctttaacaaa
gaagcgccagcctttgccgggcctgccagcagtgcggctgttttactgcagagcgagaat
ggtgatcaaattattgatgccgacgcggccttgccaacggtgatgtcaccgctgtctgct
ttcctgtcgcatgcttctctcgaagcgggtgacaaccaggcgcaagccgggcaagacgcc
atgcagttgatgaccgtgcattctgcaaagggcctggagtttgatgcggtatttattacc
ggtctcgaagaaggcttgttcccgcatgaaaacagtacacaggaagacagcggtgtagaa
gaagaacgccgcctcatgtatgtggcgattacacgtgcgcgcaaacgcctgtacctgagt
ttttcacaaacccgtatgctgcatggccagacgcgttacaacatgcgctcccgcttcctt
gatgagttgccggaagaatcattgaagtggttggcgccccgggtacagccgacctggttt
ggtaataaaaagtccgcctgggatgaagcgccggatgatgccgcgaatcgtattgctcag
accttcaagaaaagcaacgacagcatgacctggcgcataggccagaatgtggagcatgca
aaatttggtgagggtgtcattgtgaatttgaatggcggtggcggcagtggcagcctgaga
gcacaaatcaatttcggtaagtttggcatgaaggagctggacttgagcattgccaagctg
gaaaaaatataa
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