Undibacterium sp. KW1: UNDKW_5194
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Entry
UNDKW_5194 CDS
T08678
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
und
Undibacterium sp. KW1
Pathway
und00300
Lysine biosynthesis
und00470
D-Amino acid metabolism
und01100
Metabolic pathways
und01110
Biosynthesis of secondary metabolites
und01120
Microbial metabolism in diverse environments
und01230
Biosynthesis of amino acids
Module
und_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
und00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
UNDKW_5194 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
UNDKW_5194 (dapF)
Enzymes [BR:
und01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
UNDKW_5194 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
BBB63467
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Position
5755535..5756395
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AA seq
286 aa
AA seq
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MKLKFTKMHGAGNDFVVIDAINQHINFTPAQWRLIADRRFGIGADQILVVERPESQDVDF
RYRIYNADGGEVEQCGNGSRAFVQFVIEKGLTDKSTIRVQTMSGIIEPRMGADGKITVNM
GAPILEAAQVPFNAEGLESRPEGHDSLWPLDINGKQVWISAISMGNPHAVQVVASVDDFP
VAADGPLIEHHPRFPRRVNAGFMEVVDRQHIRLRVFERGAGETLACGTGACAAAVAGLRR
GLLDSPVRVSMRGGELSIAWEGEGQPVFLSGPAVTVFEGEINLTET
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaattcaccaaaatgcatggcgctggtaatgattttgtcgttatcgatgcg
attaaccagcacatcaatttcactcctgcccagtggcggctgattgctgaccgccgcttt
ggcataggggcagaccagatcctggtggtagaacgaccagaaagccaggacgtcgatttt
cgctaccgtatctataacgccgatggtggcgaagtcgaacaatgtggcaatggctcgcgc
gctttcgtgcagtttgtcatcgaaaaaggcctgaccgacaaatcgaccatacgtgtgcag
accatgtccggcatcatagagccgcgcatgggggcagatggcaaaatcacggtcaatatg
ggcgcacccatactggaagcagcgcaggtaccattcaatgccgaaggtctggagtccagg
cctgaaggacatgacagcttgtggccactggacatcaatggcaaacaggtctggatttct
gccatttccatgggtaatccgcatgcagtgcaggtggtagcctcggtcgatgacttcccg
gtcgctgctgatggcccgctgatagagcatcaccctcgcttcccgcgccgcgtcaatgct
ggcttcatggaggttgtggatcgccagcacatacgcctgcgcgtgtttgaacgcggtgcc
ggagaaaccctggcctgtggtaccggtgcctgtgccgctgctgtagctggcctgcgccgg
ggcttgctggatagcccggtacgtgtcagcatgcgcggtggtgaactttcgatcgcctgg
gagggtgaaggccagccagtattcctcagcggtccggcagtgaccgtctttgaaggcgaa
attaatttaacagaaacataa
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