Undibacterium sp. KW1: UNDKW_5691
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Entry
UNDKW_5691 CDS
T08678
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
und
Undibacterium sp. KW1
Brite
KEGG Orthology (KO) [BR:
und00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
und03009
]
UNDKW_5691 (dbpA)
Enzymes [BR:
und01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UNDKW_5691 (dbpA)
Ribosome biogenesis [BR:
und03009
]
Prokaryotic type
rRNA helicases
UNDKW_5691 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBB63964
UniProt:
A0A6N4TCN8
LinkDB
All DBs
Position
complement(6298512..6299897)
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AA seq
461 aa
AA seq
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MSESTAFNTLPLSAPMLANLESMGYKEMTAIQAASLPIILQQQDLIAQAKTGSGKTAAFG
IGMLAKLNPTYFAVQGLVICPTRELADQVANELRRLARTMPNVKIVTLCGGTAMRPQIAS
LEYGAHIVVGTPGRLIDHISRDTINLKTVQTLVLDEADRMVDMGFYDDIYDIVAATPTRR
QTLLFSATYPDDIRQASEQLLRDPVEIKVESQHAANHIEQVFYLVTPEGRNTAVATLLHH
YQPTSTIAFCNTKIHCRELTEELHAQGISALALHGDLEQRDRDEVLIRFANQSCSVLVAT
DVAARGLDIQTLGAVINVDVSKDTEVHIHRIGRTGRAGEKGLALSLATPGEKKWVKLIEE
YQGESVSWGDIHAIEAGPERDLQAPMMTICIMGGKKDKLRPGDLLGALTADLGLKKEQVG
KINVSEFVTYVAIDRQVAEKTVDRLSRTNIKGRQFRMRIVD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatccaccgccttcaataccctgccgctatccgcccccatgctcgccaatctg
gagagcatgggctacaaggaaatgacagccatacaggcagccagcctgcccattatcctg
cagcagcaagacctgatcgcccaggccaagaccggtagcggcaagaccgctgcttttggc
ataggcatgctggccaagctcaatcccacttattttgccgtccagggcctggtgatttgc
ccgacgcgtgagctggctgaccaggtcgccaatgaattgcgccgtctggccaggaccatg
ccaaacgtcaagatcgtcaccctgtgcggtggcacggccatgcgcccgcagattgcctcg
ctcgaatatggtgcccacatcgtggtcggcacacctggccgcctgatcgaccatatcagt
cgtgacaccatcaacctgaaaaccgtacaaaccctggtgctggatgaagccgaccgcatg
gtcgacatgggcttttatgatgatatctacgacatcgtcgccgccacgcccacgcgcaga
caaaccctgctgttctcggcaacctacccggatgatatacgccaggccagcgaacaattg
ctgcgcgacccggtggagatcaaggttgaatcccagcatgccgccaatcatatcgaacaa
gtgttttatctggtcacacctgaaggacgcaataccgctgtcgccacgctgctgcatcat
taccagccgacatccaccattgccttttgcaataccaagatacactgccgcgaactgaca
gaagaattgcacgcccagggcatcagcgccctggccttgcatggcgaccttgaacaacgc
gaccgcgacgaggtcttgatacgtttcgccaatcaaagctgctcagtcctcgtcgccacc
gacgtcgccgcccgcggcctggacatacaaaccctgggtgccgtcatcaatgtcgacgtc
tccaaagacaccgaagtccacatccaccgcataggccgcacaggccgtgccggtgaaaaa
ggcctggccctgagccttgccacaccgggtgaaaagaagtgggtcaaactgatagaagag
tatcagggtgaatccgtcagttggggtgatatccacgcgattgaagccggcccggaaaga
gacctgcaagccccgatgatgaccatctgcatcatgggcggcaaaaaagacaaactccgc
cccggtgatctgctcggcgcactgactgctgatctgggcttgaaaaaagaacaggtaggc
aaaatcaatgtctcggaatttgtcacctacgtcgccatagataggcaggttgcagaaaaa
acggtagataggctgagccgtaccaatatcaagggcaggcaattcaggatgcggattgtt
gattga
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