Undibacterium sp. KW1: UNDKW_5860
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Entry
UNDKW_5860 CDS
T08678
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
und
Undibacterium sp. KW1
Brite
KEGG Orthology (KO) [BR:
und00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
und03400
]
UNDKW_5860
Enzymes [BR:
und01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
UNDKW_5860
DNA repair and recombination proteins [BR:
und03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
UNDKW_5860
Prokaryotic type
UNDKW_5860
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBB64133
UniProt:
A0A6N4TDW5
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Position
complement(6519898..6521454)
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AA seq
518 aa
AA seq
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MTYSIVWFKRDLRLHDHLALHTAISKGPVLCLYVVEPSLWAQAVAANQHYQFLLESLRVL
YLALRKSGGQLHILTGEVTEVFAHIFAHQPFSAIYSHEETGNNFTYQRDKALARWCRAQQ
VEWHEFAQFGVVRRLQSRDDWQASWNAHNDLPSAALPPLSTASFAPMIPAITLPRLPPSV
QELHLDPYDPPERQRGGRQNGLMILDSFLRERSHQYRGGISSPLSAPTACSRLSPYLAFG
CLSLREVVHATRDHIASLPATAERHKKGLEAFISRLYWHCHFIQKLESEPEIEYRNMHRG
YDGLREQEFNEAHFYALVSARTGWPLVDACVTMLRQTGWLNFRMRAMLVSVAAYPLWLDW
RPVGHWLARQFLDYEPGIHWSQMQMQSGTTGMNVPRIYNPIKQASDHDPHGHFVRRWLPA
MRRVPDTWLFEPWHMPPDVQAACGVKVGVDIPEPIVDLEQATRIAKTRLFDLRKQPHMQA
PKLAVIKKHGSRKKTPGKMRQQTASSKQPVSVQLELDW
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacatatagcatcgtttggttcaaacgcgatctgcgtttgcatgatcatcttgcgcta
catacagcaatcagcaaagggcctgtgctgtgcttgtacgtggtcgagccatccttgtgg
gcgcaggctgttgcggcgaaccagcattatcagtttttgctagagagcctgcgtgtgctg
taccttgctttacgaaaaagcggtggccaactgcatatcctgacgggcgaagtcactgag
gtctttgcgcacatttttgcacaccagccattctcagctatttattcacacgaagaaacg
ggcaacaatttcacctaccagcgtgataaggcgctggcgcgctggtgtcgcgcgcaacaa
gtggaatggcatgagtttgcccagtttggtgtggtgcgtcgcctgcagagcagggatgac
tggcaggccagctggaatgcacataatgacttgccctctgcagcgctgccgccattgagc
accgccagttttgcaccaatgatacctgcaattacactcccacgattaccgccttcagta
caggagttgcacctggacccttatgatccgcctgagcgtcagcgtggtggcaggcaaaat
ggcttgatgatactggatagttttttgcgtgagcgcagccatcaataccggggcgggatt
tcatcgcccttgtcggcacccacggcttgttcgcgcctgtcgccgtacctggcatttggc
tgtcttagtttgcgggaagtcgtgcatgccacacgcgaccacatcgccagcttgccagcc
acggctgagcgtcacaaaaaagggctggaagcctttatcagtcgcctgtactggcattgt
cactttattcaaaaactggagagtgagccagaaattgaataccgcaatatgcatcgtggt
tatgacggactgcgtgagcaggaatttaatgaggcgcatttttacgcactcgtttctgca
cgcactggctggccgctggtcgatgcgtgcgtaaccatgttgcggcaaacaggctggctt
aattttagaatgcgtgccatgctggtttctgtcgcagcctatcctttgtggctggactgg
cggccagtcgggcactggcttgcgcgccagtttttggattatgagccaggcatacactgg
agccagatgcagatgcaatcaggcactacagggatgaacgtgccgcgtatttataatcct
atcaagcaggccagtgaccatgatccccatggccatttcgtgcggcgctggctgcctgcg
atgcggcgcgtacctgacacctggttatttgaaccatggcacatgccgccagatgtgcag
gctgcttgcggcgtcaaagtgggtgtcgatatccctgagcctatagtcgatctggaacag
gccactcgcattgccaagacccggttgtttgatttgcgcaagcagcctcacatgcaggcc
ccaaaattagctgtcataaaaaaacatggttcgcgcaaaaagacgcctggcaagatgcgc
cagcagactgcatccagcaaacagcctgtcagcgtgcaattggaactggactggtga
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