Undibacterium sp. YM2: UNDYM_0003
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Entry
UNDYM_0003 CDS
T10101
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
uny Undibacterium sp. YM2
Brite
Enzymes [BR:
uny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UNDYM_0003 (gyrB)
DNA replication proteins [BR:
uny03032
]
Prokaryotic type
DNA Topoisomerases
UNDYM_0003 (gyrB)
DNA repair and recombination proteins [BR:
uny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UNDYM_0003 (gyrB)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BBB64256
UniProt:
A0A809QE96
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Position
3558..6053
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AA seq
831 aa
AA seq
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MSDNTQDNTPAQPSQYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID
ESLAGHCTEINVTIHSDNSISITDNGRGIPTGIKWDDKHDPKRSAAEIVMTELHAGGKFD
QNSYKVSGGLHGVGVSCVNGLSKLLKLTIRRDGKMHTMEFAKGVVQNRELETVDGVLTSP
IKVVGDTDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVRIKLNDHRTGKEE
LFAFEGGTRGFVEYINKNKSILNPTIFQATGERQSDQNTTITVDVSMQWNDAYNEQVLCF
TNNIPQRDGGTHLTGLRAAMTRVINKYIEEHEFAKKAKVEVSGDDMREGLTCVLSVKVPE
PKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLMEKPNDAKIICGKIVEAARAREAARKAR
ELTRRKGVMDGLGLSSKLADCQEKDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGK
VLNVEKARFEKMLSSEQITTLIATLGTSIGPDEFNADKLRYHRIIIMTDADVDGAHIRTL
LLTLFYRQMPQLVERGHIYIAQPPLYKVKAGRDERYLKDDAEEATYMMTVALTGASLTPG
TGAAPITGEALGELVRQYNLANAIMMRLTRVIDRAALTAIMTGVTLKLDTAENAEASATA
LTAAIGDNAVKAVVRSDELSGAFSLRIERLYHGNIKVSSIDADFVDGADYKVLENAATTF
KGLLTEGAFIRRGEGEKAKEIAVHDFHQAMLWLRDEAERGVSKQRYKGLGEMNPSQLWET
TMDPTVRRLLKVQIEDAIAADQIFTTLMGDDVEPRRAFIESNALRAGNIDV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataacacccaagacaacactccagcgcagccaagtcaatacggcgcatcctca
atccagattctggaaggcctggaagccgtgcggaaacgccccggcatgtacatcggtgac
acctcggacggcaccggtctccatcacctggtctttgaagtgctggataactccattgat
gaatccctggcaggtcactgtaccgagatcaatgtcactatccacagcgacaactccatc
tccattactgacaatggtcgcggcatccctaccggcatcaaatgggatgacaagcacgac
ccaaaacgcagcgccgctgagatcgtcatgaccgagctgcatgccggtggcaagttcgat
caaaactcctacaaggtatccggcggtctgcatggcgtgggtgtgtcctgcgtgaatggc
ctgtccaagctgctcaagctgactatccgccgcgacggcaaaatgcacaccatggaattt
gccaaaggtgtagtgcaaaaccgcgaactcgaaaccgttgatggcgtactcacttcacca
atcaaggtcgttggtgacaccgacaagcgcggtactgaagtccacttctgggccgatgaa
gaaatcttcactcacgtagaattccattatgaaatcctggccaagcgcatacgcgaattg
tccttcctgaataatggcgtacgcatcaaactgaatgaccaccgcaccggcaaagaagaa
ttgtttgcctttgaaggcggcactcgcggctttgttgaatacatcaacaaaaacaaaagc
atactcaacccaacgatattccaggccactggcgagcgccagtctgaccagaacaccacc
atcacggtcgacgtctccatgcaatggaacgacgcctacaatgaacaggtactatgcttc
accaataacatcccgcagcgcgatggtggcacccacctgaccggcctgcgcgccgcgatg
acacgcgtcatcaacaagtatattgaagagcacgagttcgccaaaaaagccaaggtagaa
gtcagcggcgacgacatgcgcgaaggcctgacctgcgtcctgtccgtcaaagtgccagaa
ccaaagttcagctcccagaccaaagacaaactcgtctccagtgaagtacgcggcccggta
gaagagatagtcgccaagaccctgaccgacttcttgatggaaaaacccaacgacgccaag
atcatttgcggcaaaatcgttgaagccgcacgtgcccgtgaagctgcgcgcaaagcccgc
gaactgacacgccgcaaaggcgtcatggacggcctgggcctgtcttccaaactggcagac
tgccaggaaaaagaccccgccctgtgcgaactgtacatcgtcgaaggtgactctgcgggt
ggatcagccaagcaaggccgcgaccgcaagttccaggccatcttgccactgcgcggtaaa
gtcctcaacgtagaaaaagcccgctttgaaaaaatgctgtccagtgaacagatcaccacc
ctgatcgccaccctgggcaccagcataggcccggatgaattcaatgccgacaaactgcgc
taccaccgcatcatcatcatgaccgatgcggacgttgacggtgcccacatccgcaccctg
ctgctgaccctgttctatcgccagatgccacaactggtagaacgcggccacatctacatc
gcccagccaccactctacaaagtcaaggcaggccgcgatgagcgttatctcaaagatgat
gcagaagaagccacctacatgatgaccgtggccctgaccggcgcatccctcacaccaggc
acaggcgcagcccccatcactggcgaagccctgggcgaactggtacgccagtacaacctg
gccaacgccatcatgatgcgcctgacccgcgtcatcgaccgcgccgccctcaccgccatc
atgaccggcgtcacgctcaaactggacaccgcagaaaacgcagaagcatccgccactgcc
ctgactgccgccatcggcgacaacgccgtcaaagcagttgtacgcagcgacgaactctca
ggcgccttcagcctgcgcatagaacgcctgtaccacggcaacatcaaggtcagcagcatc
gatgccgactttgtcgatggtgccgactacaaagtgctggaaaacgccgcaaccaccttc
aagggcctgctcacagaaggtgcattcatccgccgcggtgaaggcgaaaaagccaaggaa
atcgccgtccacgacttccaccaggccatgctctggctgcgcgacgaagccgaacgtgga
gtcagcaaacaacgctataaaggtctgggcgaaatgaacccaagccaactctgggaaacc
accatggaccccacagtccgccgcctgctcaaagtacaaatcgaggacgcgattgccgcg
gatcaaatctttacgaccctgatgggcgacgatgtggaaccacgcagggcgtttattgaa
tcgaatgcgttgagggcggggaatattgacgtttga
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