Undibacterium sp. YM2: UNDYM_0407
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Entry
UNDYM_0407 CDS
T10101
Name
(GenBank) peptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
uny Undibacterium sp. YM2
Pathway
uny00550
Peptidoglycan biosynthesis
uny01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
UNDYM_0407
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
uny01002
]
UNDYM_0407
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
uny01011
]
UNDYM_0407
Enzymes [BR:
uny01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
UNDYM_0407
Peptidases and inhibitors [BR:
uny01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
UNDYM_0407
Peptidoglycan biosynthesis and degradation proteins [BR:
uny01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
UNDYM_0407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
BBB64660
UniProt:
A0A809PF42
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All DBs
Position
complement(425630..426778)
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AA seq
382 aa
AA seq
DB search
MKKFLASIAVSLLTMSAAVAQTLPSPTIASKAWLLLDATSNQVIAAQEPTMSVEPASLTK
IMTAYLVFSALKDKKLDLNQSINVSTRAWKVDGSSSKMFIEPNKPVTINELLYGLIVQSG
NDAAVALAEAVAGSEEAFVVQMNREAERMGLKATRFANPHGLPSKDNYSTAQDLSTLAAR
LIIDHPEFYKTYYSTKSYTYNKITQPNRNRLLMLDPTVDGMKTGHTTGGGYSLISSANRP
NGTGQRRLISVVIGTESDSVRAQESLKLLNWGFLNFETLKLYDKGQAVATPEVWKGTQPQ
VKIGFDRELYITLPKGSAAKLKPALERKDPLVAPVALNSKVGVMKVMLDGKAVAEVPVIA
LEQVNQASIFGRAWDSIRLMFK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattcctcgcctcaattgccgtttcgctgctgaccatgtcagccgcagtcgcg
caaaccctgccttcacctaccattgcatcaaaagcctggctcttgctcgatgccaccagc
aatcaggtcatcgccgcacaagaacctaccatgagcgtagagccagcctcgctgaccaag
atcatgacggcttacctggtgttctctgccctcaaggacaagaagctggacctgaaccag
agcatcaatgtctctacccgcgcctggaaagtcgatggcagcagctccaagatgtttatc
gaaccaaacaaaccagtcaccatcaatgaattgctgtatggcctgatcgtacagtccggc
aatgatgccgccgttgccctggcagaagccgtggccggtagtgaagaagcctttgtcgtg
caaatgaaccgcgaagcagagcgcatgggcctgaaagccacccgctttgccaatccgcac
ggtttgcccagcaaggacaactactctacggcacaagacctgtcgacactggcagcgcgc
ctgatcattgatcaccctgagttctacaagacgtattactctaccaagagctatacctat
aacaagatcacccagcccaaccgcaaccgcctgctgatgctagaccctacggtcgatggc
atgaaaaccggccataccactggaggtggctatagcctgatctcgtcggccaaccgcccg
aatggcacaggccagcgccgcctgatctcagtggtcatcggcaccgaaagtgactctgta
cgtgcacaggaaagtttgaaactgttgaattggggtttcctgaactttgaaaccctgaag
ctgtatgacaaaggccaggccgttgccacgccagaagtctggaaaggcacgcagcctcag
gtcaagataggttttgaccgtgagctgtatatcacattgccaaaaggctctgccgccaaa
ctaaaaccggcactggaacgcaaggacccgctggttgcccctgttgcattaaacagcaag
gtcggcgtcatgaaagtcatgctcgatggcaaagcagttgccgaagtaccagtgattgca
ctggaacaagtcaaccaggccagcatctttggccgtgcctgggattcgatacgcctgatg
ttcaagtaa
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