Undibacterium sp. YM2: UNDYM_0635
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Entry
UNDYM_0635 CDS
T10101
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
uny Undibacterium sp. YM2
Pathway
uny03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UNDYM_0635 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uny03019
]
UNDYM_0635 (pcnB)
Enzymes [BR:
uny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
UNDYM_0635 (pcnB)
Messenger RNA biogenesis [BR:
uny03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
UNDYM_0635 (pcnB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
BBB64888
UniProt:
A0A809PJT8
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All DBs
Position
complement(668674..670029)
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AA seq
451 aa
AA seq
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MIKKFIRKILGVKNKSDVASANQKPTVLGPKDHGIDPQLVSANAIRITQTLQENGFKAFV
VGGAVRDLLTGVKPKDFDIATNATPEQVKRLFRRAFIIGRRFQIVHVMFGQDLLEVTTFR
GAATDGAPKDEHGRVLRDNTFGEQHEDAARRDFTVNAMYYDPATQTVLDYHGGMKDIKKK
TLRIIGVPEARYREDPVRMLRVVRFAAKLNFTIDASTRAPIAVMAPLINNVPAARVFDET
LKLLTSGHAMACLQQLRKEGLHHGLMPLLDVVLEQPLGEKFVTLALANTDERVQQGKGVS
PGFLFASLLWHQVVEKWEAYKAAGEFPIPALHLAADDVLNTQTDALAIQRKIGSDMRDIW
AMQPRFDKRVGKTPYKMLEHPRLRAGYDFLLLRCASGEIDEEIGEWWTDFMEGDSVERDR
LINTKPKAAEAGPKKRKPRRRAPRKAAAAAE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaaatttattcgcaaaatactgggcgtaaaaaacaagagcgatgtcgccagc
gccaaccaaaagccaactgtgctgggtcctaaagaccacggcatagacccgcaactggtg
tctgcgaatgccatacgcatcacccagaccctgcaagagaatggctttaaagccttcgtg
gtcggcggggccgtgcgcgacttgctgactggtgtcaaacccaaggactttgacattgcg
accaatgcaacgcctgaacaggtcaagcgcctgttccgccgcgcctttatcataggccgc
cgcttccagatcgtgcacgtgatgtttgggcaggatttgctggaagtcaccaccttccgt
ggtgcagccaccgatggcgcacccaaggacgaacatggccgtgtcttgcgcgacaatacc
tttggtgaacaacatgaagatgctgcccgtcgcgacttcactgtgaatgccatgtattac
gacccggccacacagaccgtgctcgattatcacggcggcatgaaagacatcaaaaagaaa
accctgcgcatcataggcgtgccagaagcccgttaccgcgaagacccggtgcgcatgctg
cgcgtggtgcgctttgctgcaaaactgaacttcacgatcgatgcatccacccgcgcccct
atcgccgtgatggcaccgctgatcaacaatgtacctgccgcgcgtgtgtttgatgaaacc
ctgaaactgctgaccagcggccatgccatggcctgcctgcagcaattgcgcaaagaaggc
ctgcaccatggcctgatgcccctgctggacgtagtactggaacaacccctgggcgaaaaa
tttgtcaccctggcgctggccaatactgatgaacgcgtgcaacagggcaagggcgtctca
cccggcttcttgtttgcctccttgctgtggcaccaggtcgtcgagaaatgggaagcctat
aaagccgccggtgaattccccatccctgccctgcacctcgctgccgatgatgtactcaat
acccaaactgacgctctggcgatacagcgcaagataggatcggacatgcgcgacatctgg
gccatgcagccacgctttgacaagcgcgtaggcaagaccccgtacaagatgctggagcac
ccgcgcctgcgcgctggttatgacttcttgctgctgcgttgtgcctccggtgaaatcgat
gaagaaatcggtgaatggtggacagatttcatggaaggcgacagcgtagagcgtgaccgc
ctgataaatacaaaacccaaagcagccgaagctggccccaaaaaacgcaagccccgccgc
cgtgccccacgcaaggcagccgcagcagccgaatga
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