Undibacterium sp. YM2: UNDYM_0840
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Entry
UNDYM_0840 CDS
T10101
Symbol
pilR
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
uny Undibacterium sp. YM2
Pathway
uny02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNDYM_0840 (pilR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
uny02022
]
UNDYM_0840 (pilR)
02035 Bacterial motility proteins [BR:
uny02035
]
UNDYM_0840 (pilR)
Two-component system [BR:
uny02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
UNDYM_0840 (pilR)
Bacterial motility proteins [BR:
uny02035
]
Pilus system
Twitching motility proteins
UNDYM_0840 (pilR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
HTH_28
FleQ
AAA_16
AAA_19
VpsR
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBB65093
LinkDB
All DBs
Position
905816..907270
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AA seq
484 aa
AA seq
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MSMIEAAACPRILVVDDEAHLRELLEITLIKMGLDVDSAETLALARAHLSKRSYALVLTD
MRLPDGSGMELVQEVSALYKNTPIAVITAFGSADNAVVALKAGAFDYVSKPVALDQLRKL
VRSALQTNEVQKVQLATPEKLNVPASSFMIGQSQGMQEVRAQISRLARSMAPVIITGESG
SGKELAAREIHTSSARADKPFIAVNCGAIPETLMEAEFFGYRKGAFTGAADDREGFFQAA
NGGTLMLDEVADLPLPMQVKLLRAIQERRVRKVGATVEEAVDVRIISATHQNLAICVEEG
RFRQDLYYRLNVIELHLPPLRERLEDIVELSRNILKKLTGNDVDMSVEATDALISYDFPG
NVRELENILERAVAFANDGCIEVSDLALRGTRKLPELPIAQPVPTAIINNHSDIVPELPA
VTTLDVFSAPSLPCSLPDYLESVEREMIRRALQQTRNNRTQAAELLGVSFRQLRYQIQKL
KIQE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgatagaagctgcggcctgtccccgcatcctggtagtggatgatgaggcgcac
ctgcgcgaactgctggagattaccctgatcaaaatggggctggatgtcgatagcgcagaa
accctggcactggcccgcgcccatttgagcaagcgtagctatgcactggtattgaccgat
atgcgtctgccggatggctcgggtatggagctggtgcaggaagtgagtgcactatataaa
aatacgcccattgccgtgatcactgcttttggtagtgccgacaatgccgtggttgccttg
aaggccggtgctttcgactatgtatccaagccagtggcgcttgaccagttgcgcaagctc
gtcaggtcggccctgcaaaccaatgaggttcaaaaagtacaactggcgactccggaaaaa
ctgaacgtccccgccagttctttcatgataggccagtcgcaaggcatgcaagaggtcagg
gcgcagatcagccgtctggcacgcagcatggcaccggttattattactggcgaatctggt
agcggcaaggagttggcggcgcgcgaaatacacaccagcagtgccagggctgataaacct
tttatcgctgtcaattgcggggcaattcccgagaccttgatggaagcggaattctttggt
tacagaaaaggcgcatttaccggcgctgctgatgacagggaaggctttttccaggctgcc
aacggcggcaccttgatgcttgatgaagtagccgacctgcctttgcccatgcaagtcaag
ttactgcgtgccatacaggaaaggcgcgtgcgcaaggttggtgccacggttgaagaggca
gtcgatgtgcgcattatcagtgcgacccaccagaacctggcaatctgcgtagaagaaggg
cgcttccggcaagacttgtattaccgcctgaatgtcattgaattgcacttgccacctctg
cgcgaaagactggaggatatagtcgagctgtcgcgcaatatcctcaaaaaactgactggc
aatgatgttgatatgtcagtagaggcaactgatgccttgatcagttatgactttcccggc
aatgtgcgtgagctggaaaacatattggagcgcgcagttgcctttgccaatgatggctgc
atagaggtcagcgacctggccttgcgcggaaccaggaagttgcctgaactgcctatagca
cagccggtcccgaccgctattatcaataatcatagcgatattgttcctgaattacccgct
gttaccacgctggatgtattctctgctccaagtttgccttgctcgctgcccgactatctc
gaaagcgtagagcgcgaaatgatacgccgtgccctgcagcagacccgtaacaaccgtacc
caggcggcagaattgctgggtgtgagtttccgtcaactgcgttaccagatacagaaactg
aagatccaggagtaa
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