Undibacterium sp. YM2: UNDYM_1399
Help
Entry
UNDYM_1399 CDS
T10101
Name
(GenBank) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
uny Undibacterium sp. YM2
Pathway
uny03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
UNDYM_1399
09124 Replication and repair
03420 Nucleotide excision repair
UNDYM_1399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uny03021
]
UNDYM_1399
03036 Chromosome and associated proteins [BR:
uny03036
]
UNDYM_1399
03400 DNA repair and recombination proteins [BR:
uny03400
]
UNDYM_1399
Enzymes [BR:
uny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
UNDYM_1399
Transcription machinery [BR:
uny03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
UNDYM_1399
Chromosome and associated proteins [BR:
uny03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
UNDYM_1399
DNA repair and recombination proteins [BR:
uny03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
UNDYM_1399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
YhcG_C
Fibrillarin_2
Helicase_C
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
BBB65652
LinkDB
All DBs
Position
complement(1558351..1560609)
Genome browser
AA seq
752 aa
AA seq
DB search
MSSESTASYTVAVRALCEFTAKQGDLDLRFTPSPTAEQGMAGHATVALRRGSSYQREVKL
EGQHGSLHVRGRADGYDPDLHQVEEIKTYLGDLHAMPDNHRNLHWAQAKVYGHLLCQKLG
LQKISVALVYFNIQSQKETVLQQDLAAGELADFFALLGGRFIAWAKQEAAHRAARDLALA
DMVFPHVTFRPGQRQLAEAMYKASKRGCCLLAQAPTGIGKTIGSLFPLLKATAEHKLDKI
FYLAAKTSGRQLALHALGNIQNSTPKLGLRTLELVAKTKACEYPEAACHGDACPLAKGFY
DRLPAARAAAVEQQLLDKEGLRSIALEHQVCPYYLGIEMARWADVIIGDYNYYFDLYALL
HGLTIVNNWRVAVLVDEAHNMVTRARQMYSVELQRDSLKRLRKSPPPALKKTLNSLYRAW
LQLEKEQEADYQPHAEIPEKLLAALTRLCTEIGLYFADNPSQLAPDLQQFYLDALLFNRL
AESFADHSIFDASKAHGTSTLCIRNIVPAAFLTPRFAASHTTALFSATLSPWNYYCDTLG
LPEGTAWVDVESPFSADQLQVHVVDSVSTRYADRMRSVAPIVALMARQYHTQPGNYLAFF
SSFDYLEQVSGSFINAHPDIPVRLQTRRMNEADREGFLAQFTEDSQGIAFAVLGGSFGEG
IDLPGTRLIGAFIATLGLPQLNPINEQIRLRMDKIFGSGYDYAYLYPGLQKVVQAAGRVI
RQTDDRGVVYLIDDRFGRGDVRALLPGWWEVR
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagtgagagcaccgccagttatacggtggccgtgcgtgccctgtgcgagttcacg
gccaagcaaggtgacctggatttgcgctttaccccctcacccactgccgagcaaggtatg
gccgggcatgcaacagtggccctgcgcagaggcagcagttaccagcgtgaagtaaaactg
gaaggccagcatggcagcttgcatgtgcgtggccgagctgatggttatgaccccgacttg
caccaggttgaagaaatcaagacctacctgggtgacttgcatgccatgcctgataaccac
cgtaacctgcactgggcgcaagcaaaggtgtatggacatttgttatgccagaagctgggc
ttgcaaaagatcagtgtggcgttggtgtatttcaatatacaaagccagaaagagactgtg
ctgcagcaagacttagctgctggtgaattggcagatttttttgctttgttgggcgggcgc
tttattgcctgggcaaagcaggaagcagctcaccgtgctgcacgtgatctggctttggcg
gatatggtttttccacacgtgacattcagaccagggcaaaggcaactggctgaagcgatg
tataaggccagcaagcgcggctgttgcctgctggcgcaagcgccgacgggtataggcaag
accataggcagtttgttccctctgttgaaggcgacagcagagcacaagctggacaagatt
ttttatctggcagcaaaaacatcaggacggcaactggctttgcatgcgctgggcaatatc
cagaacagcacgccaaagctaggcttgcgcacgctggaactggtcgccaagaccaaggct
tgtgaataccctgaagccgcttgtcatggtgatgcctgtccgctcgccaaaggtttctat
gatcgcctgcctgccgcacgtgcggccgctgttgaacagcaattgcttgataaagaaggc
ttgcgcagcatcgctcttgaacatcaggtttgcccttattatctgggcatagaaatggcg
cgctgggccgatgtcatcattggcgactacaactattattttgatctgtatgctttgctg
catggtttaacgatagtgaacaactggcgtgtcgccgtactggtggatgaggcacacaat
atggtgactcgggcgcgccagatgtatagtgtagagctgcaacgcgatagcctgaagcgc
ttgcgcaagtcgccaccgccagcgctcaaaaaaactttgaacagtttgtatcgcgcctgg
cttcaactggaaaaagagcaggaggctgattaccagccgcatgccgagataccagagaaa
ctgttggccgctctgacgcgtctgtgcacagaaattggtctttactttgctgacaatccc
agccagttagcgccggacttgcagcagttttatctggatgccttgctgttcaaccgcctg
gcagaaagctttgctgatcattcgatattcgatgccagcaaagcacatggcacatcgacg
ctctgcatacgcaatatcgtgccagcggcttttttgacaccgcgctttgcggccagtcat
acgacagcgctgttctcggctactctgagtccctggaactattattgtgacacgctaggc
ttgcccgagggcacagcatgggtggatgtagagtcgcccttctctgctgatcaattgcag
gtacatgtggtggatagcgtctctacccgctatgccgaccgcatgcgttctgttgcgcct
atcgttgccttgatggcacgacagtatcatacgcagccaggcaattatctggccttcttt
agcagctttgactatcttgagcaggtcagcggcagcttcatcaatgcgcatcctgatatc
cctgtgcgtttgcaaacccggcgtatgaatgaggcagatcgtgaagggttcctggcgcag
tttaccgaagatagtcagggtattgcttttgctgtactgggcggctcatttggtgaaggc
atagatttgcctggtacacgactgataggtgcgtttatcgcgacgttgggtctgccacaa
ctaaaccccatcaatgagcaaatcaggctgcgcatggataagatatttgggtcggggtat
gactatgcttatctttaccctggtttgcaaaaggtggtgcaggctgcggggcgggtcata
cggcagacagatgatcggggggtggtgtatttgattgatgacaggtttgggcggggcgat
gtgcgggctttgttgccggggtggtgggaggtgaggtaa
DBGET
integrated database retrieval system
