Undibacterium sp. YM2: UNDYM_1449
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Entry
UNDYM_1449 CDS
T10101
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
uny Undibacterium sp. YM2
Pathway
uny02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
UNDYM_1449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uny03021
]
UNDYM_1449
Transcription machinery [BR:
uny03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNDYM_1449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF4238
SH3-A_UBE2O
Motif
Other DBs
NCBI-ProteinID:
BBB65702
LinkDB
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Position
1618072..1620669
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AA seq
865 aa
AA seq
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MTVSKTDKTAEQKGVAKDVKAPKVIKTSLAAETVKVTQAAKQATSKAVLKTATKAKDTDA
VSASATKTAGKEVSGKNATPPAKKGSQPAEAAESQLSGKTRSASAARPEPVSVSSKASVT
INKTDSKTVTKPTKNSAKAAPEVQEIKTGSAPTVSQTTDAAVLAAIDTSGYVLPGVKVPG
RRGRKPKEYQPENEEIAALNAVERAEMKAIDKAKAKDRKAKEKALLKDAFSSDPEATEEE
LERRRQKLKTLIKLGKDRGYLTFAEINDHLPENVVDPEAIEGIIGTFNDMGVAVYEQAPD
AETLLLSDNVVTVTTDDDEVEAAAEAALSTVDSDFGRTTDPVRMYMREMGSVELLTREGE
IVIAKKIEEGLKDMIQAISACPTTIAEILAAADRIAADEIKIDEIVDGLVDPNADEQAAP
VVVAAAEESSEEDEEDEEEEEEEEDDDGGAAGAAAISAEQLEQLKRDALAKFEIIATNFD
KMRKSYEKEGYNSKTYVKAQEAISGELLGIRFTAKVVEKLCDTLRGQVDEVRHVEKQILE
VVVNRCGMPRSHFIKVFPGNETNLSWVEGEVNSGHSYSAVLGRNIPSVQQLQQKLIDLQS
RVVLPLPDLRNINKKMSAGEMKARKAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGN
IGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQ
ILQETGVEPDPATLAIKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDNHTL
APADAALHASMRNVVKDVLDSLTPREAKVLRMRFGVEMSTDHTLEEVGKQFDVTRERIRQ
IEAKALRKLRHPSRSDKLKSFLEGN
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
gtgactgtcagtaaaacagacaaaacagcggagcaaaaaggggttgcgaaagacgttaaa
gcgcctaaagtgataaagacctcactggcagccgagaccgtcaaggtgacgcaggcagca
aaacaggcaacaagtaaagcagtattgaaaacggcaacaaaagccaaagacacggatgca
gtatccgcgtctgcgacaaaaacggctggtaaggaagtgagcggcaagaatgcgacacca
ccggcaaaaaaagggagtcagccagcagaagcggccgaatcccagctcagtggaaaaacc
aggagtgcatctgcagcccggccagaaccagtatccgtatcatcgaaagcttctgtgaca
attaacaaaaccgattcaaagacagtgactaagccaaccaagaattcagcgaaagctgca
ccagaggtgcaggaaatcaaaaccggttctgcgcctaccgtaagccagacgaccgatgct
gcggtgcttgccgcgattgacacctccggctatgtattgcccggggtgaaggtgcctggc
cgccgtggtcgcaagccaaaagaataccagcctgagaatgaagaaatcgccgcgctcaat
gcagtagagcgcgccgagatgaaagccatagacaaggccaaggcaaaagaccgaaaggcc
aaagaaaaggctttgctcaaagatgccttctcttctgatcctgaagcgacagaagaagaa
ctcgagcgccgtcgccagaaactgaaaaccctgatcaaactgggtaaggaccgtggctac
ctgacgtttgcagaaatcaacgatcacttgccagaaaacgttgttgaccctgaagccatc
gaaggcatcatcggtaccttcaacgacatgggcgtggccgtctacgagcaagcccctgat
gctgaaaccctgttgttgtcggataacgtcgtcactgtcacgaccgatgatgatgaagtt
gaagccgctgctgaagctgcactttctacggtcgattctgattttggtcgcaccactgac
cctgtgcgcatgtatatgcgcgaaatgggttcggtcgagttgctgacgcgtgaaggcgaa
atcgtcatcgcgaagaaaatcgaagaaggcctgaaagacatgatacaggcgatttctgcc
tgcccaaccacgattgcagaaatcctcgctgcggcggaccgtatcgctgccgatgaaatc
aagatcgatgaaatcgtcgatggcctggttgatccgaatgcggatgagcaggctgcgccg
gtagtggtcgctgctgccgaagaatcgtctgaagaagatgaagaggacgaagaggaagaa
gaggaagaagaagacgatgatggcggtgccgctggcgcagctgctatctctgctgagcaa
ctcgaacaactgaagcgcgatgctctggcaaaattcgaaatcattgcgacgaattttgac
aagatgcgcaagtcctacgaaaaagagggctataactccaagacttacgtcaaggcgcag
gaagcgatttccggggagctgctgggcatacgctttaccgcaaaagtcgttgaaaaatta
tgcgataccttgcgtggtcaggttgatgaagtgcgccatgtagaaaaacagatactcgaa
gtggtagtcaatcgttgcggcatgccacgttctcacttcatcaaggttttccctggtaat
gaaaccaatctgagctgggttgaaggcgaagtgaattccggtcattcctacagtgctgtg
ctgggccgtaatatcccttcagtgcaacaactgcagcagaaactgatagacctgcaatcc
cgtgtcgtcctgcctttgcctgatctgcgcaacatcaataaaaagatgtctgccggtgaa
atgaaggcacgcaaagccaagcgtgaaatgaccgaggccaacttgcgtctggtgatttcg
atcgccaagaaatacacgaatcgtggtttgcaattcctggatctgattcaggaaggcaat
atcggtttgatgaaggcagtcgacaagtttgaataccgtcgtggttataaattctcgacc
tatgcaacatggtggatacgtcaggccattacccgttctatcgccgatcaggcacgcacg
atccgtattccagtgcacatgatagaaacgattaataaaatgaatcgtatctcgcgtcag
attttgcaagagacaggtgtagagcctgatcctgcaacgctggcgatcaagatggaaatg
ccggaagataaaattcgcaagatcatgaagattgcgaaagagccgatttccatggagaca
ccgataggcgacgatgatgattcccatctgggcgatttcatcgaagacaatcacacattg
gcgccagccgatgctgccctgcacgcatcgatgcgcaatgtagtaaaagacgtgctcgac
tccttgacgccgcgcgaagcaaaagtattgcgcatgcgttttggcgttgaaatgtccacg
gatcataccctcgaagaagtaggtaaacaatttgacgtgactagagaacgtattcgccag
atagaagccaaggctttgcgaaaattacgccatccgtcacgttcggataagctcaagagc
ttcctcgaaggtaattaa
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