Undibacterium sp. YM2: UNDYM_1539
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Entry
UNDYM_1539 CDS
T10101
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
uny Undibacterium sp. YM2
Pathway
uny00541
Biosynthesis of various nucleotide sugars
uny01100
Metabolic pathways
uny01250
Biosynthesis of nucleotide sugars
Module
uny_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
UNDYM_1539 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
uny01005
]
UNDYM_1539 (kdsB)
Enzymes [BR:
uny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
UNDYM_1539 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
uny01005
]
Lipid A
UNDYM_1539 (kdsB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
BBB65792
UniProt:
A0A809Q902
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Position
1714855..1715613
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AA seq
252 aa
AA seq
DB search
MSFIAIIPARLASSRLPNKPLADIGGKPMVVRTAEQALLSGASAIMVATDHADIVAACKA
HGVPVCMTRPDHPSGTDRIAEVAASMNLAEDAVVVNVQGDEPLIDPALIAATAALVSADV
PMATAAHPIHAVEDGFNPNVVKVVLDKHGRALYFSRATIPWHRDGFAVSREQFPPAYAPL
RHIGLYAYRNDFLKKYPQLAVSPLEQIEALEQLRVLWHGYAIAVHVTASSPASGVDTAED
LERVRQFFRDKV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagttttatcgctattatcccggcccggctggcctccagccgtttgccaaataaaccg
ctggctgacataggtggcaagcccatggtggtgcgcaccgccgagcaggcattattgtct
ggcgccagcgccattatggtggctacagaccatgctgatatcgtcgcagcctgcaaggcc
cacggtgtgcccgtctgcatgacgcggcctgatcatccgtccggtactgaccgcattgcc
gaagttgctgccagcatgaacctggcagaagatgccgttgtcgtcaatgtgcagggtgat
gaaccactgatagatccggccttgattgccgctaccgcagcgctggtgagcgctgatgtg
cctatggcgactgcagcccatcctatccatgcggtcgaagatggttttaatcccaatgtc
gtcaaggtggtattggacaagcatggccgcgcactgtatttttcacgcgcaaccataccc
tggcacagggatggatttgctgtcagccgcgaacagttcccgccagcctatgcaccttta
cgccatattggtttgtatgcctaccgcaacgatttcttaaaaaaatatccgcaactcgct
gtttctccattggaacaaattgaggctttggagcagttgcgggttttgtggcacggctat
gcaattgctgtccatgtgacagcttccagccccgcatccggcgtggatacggcagaagac
ctggaacgtgtcaggcagtttttcagggataaggtataa
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