Undibacterium sp. YM2: UNDYM_1875
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Entry
UNDYM_1875 CDS
T10101
Symbol
selD
Name
(GenBank) selenide, water dikinase
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
uny Undibacterium sp. YM2
Pathway
uny00450
Selenocompound metabolism
uny01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
UNDYM_1875 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uny03016
]
UNDYM_1875 (selD)
Enzymes [BR:
uny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
UNDYM_1875 (selD)
Transfer RNA biogenesis [BR:
uny03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
UNDYM_1875 (selD)
Prokaryotic type
UNDYM_1875 (selD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
BBB66128
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All DBs
Position
complement(2062761..2063732)
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AA seq
323 aa
AA seq
DB search
MSKETDAPVRLTSFSHGGGCGCKIAPGVLAEILKKSSGFPVPPALMVGIETADDAAVYKL
NDEQALIATTDFFMPIVDDPFDFGRIAATNAISDIYAMGGTPIMALALVGMPVNQLPLDV
IGKIIQGGETICAEAGIPIAGGHTIDSVEPIYGLVVMGLIHPSRVKRNADAKAGDKLILS
KPLGVGILSAALKKQALDEAGYATMIANTTKLNKPGQALSGLDGVHAMTDVTGFGLLGHL
LEVCRGSKLAARLDMSAVPLLANVEELATNGYITGASARNWAAYGSSVQFDTQISPAQQA
LLTDPQTSGDYWLPAMRQLLKMF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaactgacgcccccgtccgactgacctctttctcgcatggcggcggctgc
ggctgcaagattgcgcccggcgtacttgctgaaatactaaaaaaatcctcaggctttccg
gtaccgcctgccctcatggtggggatagaaactgcagacgacgcagccgtctataaactc
aatgatgagcaggcactgattgccaccacggattttttcatgcccatcgtggatgatcct
tttgattttggccgcatcgctgccaccaatgccatttcggatatctatgccatgggcggc
acgcccatcatggcgctggcactggtgggcatgcctgttaatcaattacctctggatgtc
atcggcaaaattatccagggcggtgaaaccatctgtgccgaggctggcatacccatagcc
ggcggccacaccattgactctgtagaacccatttatggcctggtcgtcatgggtctgatt
cacccatccagggttaaacgcaatgccgatgccaaggcaggcgacaaactcatactcagc
aagccgctgggtgtaggcatattgtctgccgcactgaaaaagcaggcactggacgaggct
ggctatgccaccatgatcgccaataccaccaaactgaacaaacccgggcaggccctgtct
ggccttgatggcgtgcatgcgatgaccgacgtcaccggctttggcctgctaggccatttg
ctggaagtctgccgtggttcgaaactggcagcccggctggatatgtcagcagtacctttg
ctggcgaatgtggaggagctggccacaaatggctatatcaccggtgcctctgcccgtaac
tgggcagcctatggctcatctgtgcagttcgacacacagatcagtcccgcccagcaagcc
ttgctgactgatccgcaaacatcgggggattactggttgcctgcgatgcggcagttgttg
aagatgttttaa
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