KEGG   Undibacterium sp. YM2: UNDYM_1956
Entry
UNDYM_1956        CDS       T10101                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
uny  Undibacterium sp. YM2
Brite
KEGG Orthology (KO) [BR:uny00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:uny03400]
    UNDYM_1956 (radA)
DNA repair and recombination proteins [BR:uny03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     UNDYM_1956 (radA)
SSDB
Motif
Pfam: ATPase AAA_25 DnaB_C DUF7125 AAA_22 AAA_24 AAA_16 AAA GvpD_P-loop ChlI Lon_C AAA_14 Rad51 SLFN-g3_helicase nSTAND_NTPase5 nSTAND3 NTPase_1 NB-ARC CobU RecA_N TniB ATPase_2 AAA_28 MCM ABC_tran AAA_5 AAA_29 NACHT AAA_19 PAXNEB
Other DBs
NCBI-ProteinID: BBB66209
LinkDB
Position
2158114..2159379
AA seq 421 aa
MGNRFSAKPQGLAQSAPVLNLAEIEALDVPRFGTGIDEFDRVLGGGLVAGGVVLIGGDPG
IGKSTLLLQALANLAQIKRVLYVSGEESGAQIALRAKRLSLDAKDLQLQAEIQLEKILNS
LAEHKPQVVVIDSIQTMYSDALSSAPGSVAQVRECAAQLTRVAKTMDITMILVGHVTKEG
ALAGPRVLEHIVDTVLYFEGDTHSSFRLVRAIKNRFGAVNELGVFAMTEKGLKGVSNPSA
LFLSQHDAQVAGSCVMVTQEGTRPLLVEIQALVDSSHAPNARRLSVGLEQNRLAMLLAVL
HRHAGVAAFDQDVFINAVGGVKIAEPAADLAVLLAINSSMRNKPLPRGLVVFGEVGLAGE
IRPAPRGQERLREAAKLGFSIAMIPKSNAPKQKIEGLTIIGVDRIEEALSRIRDVDSEIP
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
gtgggtaaccgttttagcgcaaaaccacaggggctcgcgcaatctgcgccggtactgaac
ctggctgaaattgaggcgcttgatgtaccacgctttggtaccggcattgatgaatttgac
cgcgtgctcggtggcgggctggttgccggcggcgtggtgctgataggtggtgaccctggc
ataggtaaatccactttgctgttgcaggcgctggccaatctcgcacagataaaaagagtc
ttgtatgtcagtggcgaagagtcgggagcacaaatcgccctgcgcgccaagcgcctgtca
ttggatgccaaagacttgcaattacaggctgagatacaactggaaaaaattctcaattcc
ctggctgagcataagccgcaagtcgtggtcattgattccatccagaccatgtattcagat
gccctgagttctgcgcccggctcagttgcccaggtacgcgaatgtgccgcccagttgaca
cgtgttgccaaaaccatggacatcaccatgatactggtcggccatgttactaaagaaggt
gcactggccgggccacgtgtgcttgagcatatcgttgatacggtcttgtattttgaaggt
gatacccattccagtttccgcctcgtgcgggcgattaaaaaccgttttggtgcagtcaat
gaactcggtgtgtttgccatgactgaaaaaggcttgaagggggtatccaatccttctgcc
ttgttcctgtcgcagcatgatgcccaggtggctggttcttgcgtcatggtcacgcaagag
gggacgcggcccttgctggtagagatacaggcactggttgacagttcgcatgcccctaat
gcccgtcgtttgtcagtaggcttggagcaaaaccgtctggccatgttgctggcggtgttg
cacaggcatgcaggtgtggcggcttttgatcaggatgtgtttatcaatgctgtaggtggc
gtcaagattgcagaaccagccgccgatctggccgtgttgctggcgattaactcttcgatg
cgtaataaacccttgccgcgtggactggtggtgtttggtgaggtcgggctggcgggtgag
atacgcccagcgccacgcgggcaagaacgcttgcgcgaagcggccaagctgggcttttcg
attgcgatgatcccaaaatcaaatgcgcccaaacaaaaaatcgaaggcctgaccatcata
ggtgtggacaggatagaagaggccctgtccagaatccgtgatgtcgatagcgaaatcccg
gattag

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