KEGG   Undibacterium sp. YM2: UNDYM_2428
Entry
UNDYM_2428        CDS       T10101                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
uny  Undibacterium sp. YM2
Pathway
uny03410  Base excision repair
uny03430  Mismatch repair
uny03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:uny00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    UNDYM_2428 (recJ)
   03430 Mismatch repair
    UNDYM_2428 (recJ)
   03440 Homologous recombination
    UNDYM_2428 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:uny03400]
    UNDYM_2428 (recJ)
DNA repair and recombination proteins [BR:uny03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     UNDYM_2428 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     UNDYM_2428 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      UNDYM_2428 (recJ)
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 Glyco_transf_4
Other DBs
NCBI-ProteinID: BBB66681
UniProt: A0A809QUN0
LinkDB
Position
complement(2660547..2662235)
AA seq 562 aa
MTRITVRPCPFRESEMLRQNGLHPVLARLYASRGATAEKELSTELNAMLPPAGLLHIDQA
AKFLADAIAQNKKLVIVADYDCDGATACAVGLRGLRMLGANVDYIVPNRFEYGYGLTPEI
VALTQKEKSPDVIVTVDNGIASVDGVAAANAQGIAVVVTDHHLPGDHLPDAAVIVNPNQP
ECGFPSKNLAGVGVMFYVLLALRAELRQRGVFDQQNQPKLDTLLDLVALGTVADVVKLDA
NNRILVAQGLKRMRAGRMCAGIAALFRVAGREPHNASPFDLGFALGPRLNAAGRLADMAL
GIECLTTDDEGRAWQIAQELNSINADRKDIEREMQDVALLHLDDFQPQDSNTITVFDESW
HQGVIGIVASRLKDKFYRPTITFAPGGEGLIKGSGRSIPGFHLRDALDLVSKHAPSLIQK
FGGHAMAAGLTLRSEDFPAFQQAFEAVGKSWLQAHQLERVVETDGPLEEAYYTTDFIRLL
DTQVWGQGFPPPIFCDDFKLISQRILKERHLKLVLEKNKLRYDAIWFGHTDTLPENVHVA
FRLDANEYNGVTRVQLMVEHID
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgacacgcattacagtacgcccctgccctttccgtgaatctgaaatgctgcgccagaat
ggcctgcatcccgtattggcgcgcctgtatgcctcacgcggtgcaacagcagaaaaagaa
ctcagcaccgagttgaatgccatgctgccgcctgccgggcttttgcatatagaccaggct
gcgaaatttttggcagatgccatcgcgcaaaataaaaaactcgtcatcgtcgccgattac
gactgcgatggtgcgactgcctgtgcggtaggtttgcgcggcttgcgcatgctgggagca
aatgttgattacattgtcccgaatcgttttgaatatggctatggcctgacgccagaaatc
gtggcattgacgcaaaaagagaaatcccctgatgtcatcgtcactgtcgataatggcatt
gccagtgtggatggcgtggcagcggccaatgcccagggcattgccgtggtagtcacggat
caccatttgccgggtgatcatttgccggatgctgctgtcatcgtcaatccaaatcagcct
gaatgcggctttcccagcaagaacctggccggtgtaggcgtcatgttttatgtcttgctg
gctttgcgggcagaactacgccagcgcggcgtgttcgaccagcaaaatcaacccaagctt
gatactttactggatctggttgcgctaggtacggttgctgacgtggttaaactggatgcc
aataaccgcatcctggtggcgcaaggcctgaagcgcatgcgcgctggccggatgtgtgcg
ggcatagctgcactattccgcgtagctggccgcgaaccacacaatgccagcccttttgat
cttggcttcgctcttggccccagactcaacgctgctggtcgtctggctgacatggccctg
ggcatagaatgcctgaccacggatgacgaaggccgcgcctggcaaatcgcgcaggaatta
aacagcatcaatgctgaccgcaaagacatagaacgtgaaatgcaggatgtggcgctgctt
cacctggatgatttccagccacaagatagcaataccattaccgtgtttgatgaaagctgg
catcagggtgtcattggtatcgtcgcctcgcgcctgaaagacaagttttatcgccccacg
attacctttgcacctggaggcgagggattgatcaaaggttcgggtcgttccataccaggc
tttcatttgcgtgatgcgcttgatctggtatccaagcacgcacccagcctgatacaaaaa
tttggtggtcatgcaatggcagcaggtctgaccttgcggtctgaagacttcccggcattc
cagcaggcttttgaagccgtaggaaaaagctggttacaggcacaccagcttgagcgggtg
gtagaaactgatggtccactggaagaggcctattacacgacagactttatccgcctgctg
gatacgcaagtatgggggcaaggtttccctccccccatattttgcgatgactttaaactg
atatcccagagaatattaaaagagcgccatttaaaactggtgctggagaaaaacaagctg
cgctatgatgcaatctggttcggccataccgacaccctgcctgaaaacgtccacgttgcc
ttcaggctcgatgccaatgaatacaatggtgtcaccagagtacagttaatggtggagcac
atagattaa

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