Undibacterium sp. YM2: UNDYM_2459
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Entry
UNDYM_2459 CDS
T10101
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
uny Undibacterium sp. YM2
Pathway
uny03030
DNA replication
uny03430
Mismatch repair
uny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UNDYM_2459 (holB)
03430 Mismatch repair
UNDYM_2459 (holB)
03440 Homologous recombination
UNDYM_2459 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uny03032
]
UNDYM_2459 (holB)
03400 DNA repair and recombination proteins [BR:
uny03400
]
UNDYM_2459 (holB)
Enzymes [BR:
uny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UNDYM_2459 (holB)
DNA replication proteins [BR:
uny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UNDYM_2459 (holB)
DNA repair and recombination proteins [BR:
uny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UNDYM_2459 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
DNApol3-delta_C
RNA_helicase
NACHT
TsaE
NPHP3_N
ResIII
nSTAND3
AAA_22
AAA_5
AAA_33
Mg_chelatase
AAA_14
VapE-like_dom
EF-hand_14
Motif
Other DBs
NCBI-ProteinID:
BBB66712
LinkDB
All DBs
Position
2689197..2690237
Genome browser
AA seq
346 aa
AA seq
DB search
MTQHPLYSWQEDAWQQIQALGQRLPHAFLLHGPQGIGKTVFAEHLAQSLLCENPGQGGHA
CQQCGSCGWFAQYSHPDYRRVRPELLDEEDAPVGEEAEAPAKTSKASKAPSKEIVINQIR
ALSDFMNISTHRSGRRVIVLYPAEALNVPAANALLKSLEEPNANTVFILVSNSIDRLLPT
ILSRCHKFGLGLPDAGIALEWLHKQGIKDADVWLAQQGGAPLAAFDMAHSDLRADLDEFI
RFLSKPGTELSLKTADKMQKMEMPVVVGWLQRWLYDIFSYKQSGRIRYHPRYEKELKSLS
MQVDEPALQQFIKNCNERQAIASHPLSAKLFLEDMLLEYSALFGTI
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaacatcccctatatagctggcaagaagatgcctggcagcagatacaggctttg
ggacaacgcttgccccatgcctttttattgcatgggccgcaaggcataggtaaaactgtg
tttgccgagcatctggcgcagtcactgctttgcgaaaacccggggcagggtgggcacgcc
tgccagcaatgtggttcttgtggctggtttgctcaatacagccatcccgactatcgccgt
gtcaggccagaactgctggacgaagaagatgcgccagttggtgaagaggctgaagctcct
gccaaaaccagcaaggccagtaaagcgccttccaaggaaatcgtcattaatcaaatccgc
gcgttgtcggatttcatgaatatttctacccaccgtagcggccggcgcgtcatcgttctg
tatcctgccgaggcgctgaatgtgcctgcggcaaatgctttgttgaaatccctggaagaa
cccaatgccaatacggtattcattctggtctcaaacagcatagacaggttgctgccaacc
atcttgtcgcgttgtcacaagtttggacttggcttgccggatgctggtattgcgctggaa
tggctgcataagcagggcatcaaggatgccgatgtttggttggctcaacagggtggagcg
cctttggcagcattcgacatggcacattcagacttgcgtgctgatctggatgaatttata
cggtttttgagtaaacctggtacagagttgagcctcaaaactgccgacaagatgcagaaa
atggaaatgccagtcgtcgtcggctggctacaacgttggctctacgatatattttcctat
aaacaaagcggcagaatccggtatcatcctcgctatgagaaggagttgaagtcattgtcc
atgcaggttgatgagccagccttgcaacaattcatcaagaattgcaatgaaagacaggcg
attgccagtcaccctttgtcggccaaattatttttggaagatatgctgcttgaatattcc
gcattattcggcactatttga
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