Undibacterium sp. YM2: UNDYM_2533
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Entry
UNDYM_2533 CDS
T10101
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
uny Undibacterium sp. YM2
Pathway
uny00300
Lysine biosynthesis
uny01100
Metabolic pathways
uny01120
Microbial metabolism in diverse environments
uny01230
Biosynthesis of amino acids
Module
uny_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
UNDYM_2533 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
uny01002
]
UNDYM_2533 (dapE)
Enzymes [BR:
uny01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
UNDYM_2533 (dapE)
Peptidases and inhibitors [BR:
uny01002
]
Metallo peptidases
Family M20
UNDYM_2533 (dapE)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
BBB66786
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Position
complement(2767962..2769089)
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AA seq
375 aa
AA seq
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MSKTLALTEQLIALDSVTPEDKGCQNTLIALLEPLGFQCETIQSGDVTNLWARRGQTQPL
LVFAGHTDVVPTGPVTQWQSAPFTPTHRDGKLYGRGAADMKTSIAAFVVATEEFIADHPD
HKGSIGFLITSDEEGPATDGTVVVCEKLKARGEQLDYCIVGEPTSVDKLGDTIKNGRRGT
MSGKLIVKGVQGHIAYPQLAKNPIHLAAPALAELVAEVWDEGNEYYLPTSWQMSNIHAGT
GASNVIPGEAVIDFNFRFSTASTAEGLQQRVHAILDKHGLEYELKWTVGGHPFLTPKGSL
SDALGDAIRAETGIETELSTTGGTSDGRFIAKICPQVVEFGPPNASIHKIDEHIELQYID
PLKNIYRRTLENLLT
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacttgccctgaccgaacagctgattgcgctggattctgtcacacctgaa
gacaaaggctgccaaaacactttgatcgccctgctggaacctctgggcttccagtgcgaa
accatacagtctggtgacgtaaccaatctgtgggccagacgtggtcagactcagcccttg
ctggtgtttgctggccatactgatgtagtacctactggccctgtcacacaatggcagtca
gccccatttacacctactcacagggatggcaagctgtatggccgtggtgctgctgatatg
aaaacttccatcgccgcctttgtcgtggcaacagaagaatttatcgctgaccacccggat
cataaaggctccatcggtttcctgatcaccagtgatgaagaaggcccggccacggacggc
acagtggtcgtttgcgaaaagctcaaagctcgtggcgaacagcttgattattgcatcgtt
ggcgaaccaacatccgtagataaactgggtgacaccatcaagaatggccgtcgcggcacc
atgtcgggcaagttgatcgtcaaaggtgtgcaaggccatatcgcctatccgcagctggca
aaaaacccaattcatctggccgcccctgcgttggctgaactggtggctgaagtctgggat
gaaggcaatgagtattacctgcccacatcctggcaaatgtcgaatattcatgccggcact
ggtgcttccaacgttatccctggcgaagcggttatcgatttcaatttccgtttttccact
gccagcacagccgagggtctgcaacaacgtgtgcatgccatactcgacaaacatggcttg
gaatatgagttgaagtggacagtcggtggacatcctttcctgacacccaaaggtagcctc
agcgatgcactgggtgatgcgatacgtgctgaaactggcatagaaaccgaactttccact
actggaggtacatctgatggccgtttcattgccaagatctgtccacaggttgtggaattt
ggtccgccgaatgccagcatccataaaattgacgaacacatagagcttcagtacatagac
ccgctcaagaacatttatcgccgcactctggaaaacctgctgacctaa
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