Undibacterium sp. YM2: UNDYM_2847
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Entry
UNDYM_2847 CDS
T10101
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
uny Undibacterium sp. YM2
Pathway
uny03030
DNA replication
uny03430
Mismatch repair
uny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UNDYM_2847 (dnaQ)
03430 Mismatch repair
UNDYM_2847 (dnaQ)
03440 Homologous recombination
UNDYM_2847 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uny03032
]
UNDYM_2847 (dnaQ)
03400 DNA repair and recombination proteins [BR:
uny03400
]
UNDYM_2847 (dnaQ)
Enzymes [BR:
uny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UNDYM_2847 (dnaQ)
DNA replication proteins [BR:
uny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UNDYM_2847 (dnaQ)
DNA repair and recombination proteins [BR:
uny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UNDYM_2847 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BBB67100
LinkDB
All DBs
Position
complement(3134264..3134971)
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AA seq
235 aa
AA seq
DB search
MRRQLVLDTETTGLNARNGDRIIEIGCVELVNRKLTGNNFHRYINPERDSEEGALAVHGL
TTEFLSDKPKFAEIAEEFCAYIKDAEIIIHNAPFDIGFLNAELARLDLPVLTEYCPSVID
TLVQAKELHPGKRNSLDALCTRYEISNSHRKLHGALLDAELLADVFLAMSRGQNSFEIEV
EEDDAPKVQEVVAFDMPVGEIAVLMATEEEMGEHEKLLTGLDKQIKDKCIWRATL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaggcagttggtcctcgataccgaaaccacgggtttgaatgcgcgcaatggcgac
cgcattatagaaattggttgcgtagaattagtaaaccgcaagctgacaggtaataatttc
catcgctacatcaatcctgagcgagattccgaagaaggtgctttggcagttcacggcctg
accaccgaatttttgagcgacaagcctaagttcgccgagattgccgaagagttttgcgct
tatatcaaagatgccgaaatcattatccataacgcaccttttgacatcggatttttgaat
gccgaactcgcgcgtctggatttgcccgtattgacagaatattgccccagtgtcattgat
acattggttcaggcaaaagaattgcatccaggtaagcgtaattcgctggatgcgctctgt
acccgttatgaaatttcgaattcccaccgcaaattgcacggcgctttgctggatgctgaa
ttattggcagatgtttttctggcaatgtcacgcggacagaacagctttgagattgaagta
gaagaagacgatgcgccaaaagtgcaggaggtcgtggcttttgatatgccggttggcgag
attgctgtattgatggccacggaagaagagatgggtgagcacgaaaaactcctgacaggg
ctggataagcagattaaagacaaatgcatctggcgtgcgactttgtag
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