Undibacterium sp. YM2: UNDYM_2992
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Entry
UNDYM_2992 CDS
T10101
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
uny Undibacterium sp. YM2
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uny03016
]
UNDYM_2992 (truB)
Enzymes [BR:
uny01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
UNDYM_2992 (truB)
Transfer RNA biogenesis [BR:
uny03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UNDYM_2992 (truB)
Prokaryotic type
UNDYM_2992 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBB67245
UniProt:
A0A809PXK7
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Position
complement(3300287..3301183)
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AA seq
298 aa
AA seq
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MHGVLLLDKLVGFSSNDALIKAKRFLNAAKAGHTGTLDPFATGLLPLCFGEATKFSQDLL
EADKTYTTVVHLGVTTTTGDTEGEVLEEKPVAVSIEQIQHALQQFTGPIQQVPPMYSALK
RDGKPLYEYARAGITLEREARSVTIHELELLAYEAPFLSLKVKCSKGTYVRVLGEDIGAM
LGCGAHLKELRRIGVGHLVLEKSITLEHLESLPEPERLALLAPVDALLSSFDPVYLTDEL
SRRFLHGQRLALNKEEVTLPIETGRVRVYRESDGQLLGSAQLQEYGILAPERLIATEH
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgcacggtgtattactattggataagctggttggtttttccagtaatgacgccctgatc
aaggccaagcgttttttgaatgccgccaaagcgggacataccggcacgctcgatccgttt
gctaccggcttgctacctctgtgctttggtgaagctaccaagttttcccaggatttgctc
gaagcggacaagacctatactacggtggtacaccttggcgtcacgacgacaaccggggac
acggaaggtgaagtgctggaagaaaagcctgtagccgtcagcattgagcaaatccagcat
gctttacagcaattcactggcccgatacagcaagtgccgcccatgtattcagcgctcaaa
cgtgatggcaaacctttgtatgagtacgcacgcgctggtatcacgctggagcgtgaagcg
cgcagtgtcaccattcatgagctggaattgctggcttacgaagcgcctttcctgagcctc
aaggttaaatgcagtaagggtacttatgtgcgggtgctgggtgaagacataggtgcaatg
ctgggttgcggcgcacatctgaaagaattgcgccgtatcggtgtggggcatctggtattg
gagaaatccattactctggagcatcttgaaagcttgccagaacccgagcgtctggcattg
ctggccccggttgatgccttgttgtccagctttgatcctgtttacctcacagatgaactg
tcgcgtcgcttcctgcacggccagcggctggcattaaataaagaagaagtcacattgccc
attgaaactggccgcgttcgcgtctatcgtgaatcagatgggcagttgctgggttctgcc
cagttacaggaatacggcatactcgcgcccgagcgcctgattgccactgaacattaa
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