Undibacterium sp. YM2: UNDYM_3279
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Entry
UNDYM_3279 CDS
T10101
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
uny Undibacterium sp. YM2
Pathway
uny00260
Glycine, serine and threonine metabolism
uny00630
Glyoxylate and dicarboxylate metabolism
uny00670
One carbon pool by folate
uny00785
Lipoic acid metabolism
uny01100
Metabolic pathways
uny01110
Biosynthesis of secondary metabolites
uny01200
Carbon metabolism
Module
uny_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
UNDYM_3279 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
UNDYM_3279 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
UNDYM_3279 (gcvP)
00670 One carbon pool by folate
UNDYM_3279 (gcvP)
Enzymes [BR:
uny01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
UNDYM_3279 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BBB67532
UniProt:
A0A809QEL0
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Position
complement(3613516..3616404)
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AA seq
962 aa
AA seq
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MTRPSLTQLEAHDAFIARHIGPSEAEQAAMLKTLGYADRTALIDAIVPANIRRHDVLPLA
QFTEAKSEQEALATLKALASKNRVLKSLIGQGYYNTHTPGVILRNIFENPGWYTAYTPYQ
PEISQGRLEAILNFQQVITDLTGMDIANASMLDEGTAAAEAMTLIQRVGKSKSNVFYVAA
DVLPQTREIIETRAKPLGIEVRTCAGNEALDNDCFGVLLQYPGVDGSIVDYREYAAALHA
KGAMVIAAADLLALTLIASPGEWGADVVVGNSQRFGVPLGFGGPHAGYMGTRDAFKRSMP
GRLVGVTIDAQGNKAYRLALQTREQHIRREKATSNICTAQVLLAVIASMYAVYHGPAGLR
QIALRVHRLTGVLAGGLKQQGLTIANTTYFDTLTVNVANAAAYHQAAEAAGYNLRQISAT
QVGVSLDETVTRADVEALWAIFAKASGVTTAPDFAAIEAGVNDAYPAALTRGTTYLTHPT
FNRYHAEHEMLRYLRSLADKDLALDRTMIPLGSCTMKLNATSEMIPVTWPEFSSIHPFAP
NDQTIGYREMIAQLEAMLCAATGYDAVSLQPNAGSQGEYAGLLVIQAYHASRGEAHRNIC
LIPSSAHGTNPASASMVGMDVVVVACDDKGNVDLADLQAKAEKHSANLAAAMVTYPSTHG
VFEEGIQQLCEIVHSHGGQVYVDGANMNALVGVAAPGKFGGDVSHLNLHKTFCIPHGGGG
PGVGPVAVGAHLAKFLPNQKSTGYVRGEDGISAVSAAPFGSASILPISWMYIAMMGAEGL
KAATETAILAANYIAKRLAPHYPVLYSGHDGLVAHECILDLRPLTDATGISNEDVAKRLI
DFGFHAPTMSFPVPGTLMIEPTESESQAELDRFIDAMISIREEIAKVASGEFDAKDNPLK
HAPHTAEVLIANEWSHAYSREVAAYPVASLRKNKYFAPVGRADNVYGDRNLFCSCIPVSD
YE
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtccttcactgacccaactggaagcgcacgacgctttcatcgctcgccatatc
ggcccttctgaagcagaacaagccgccatgctgaaaaccctgggctatgctgaccgcaca
gccctgattgatgccatcgtcccggccaatatccgtcgtcacgatgtgctgccactggcg
caattcacagaagccaagtccgaacaggaagcactggccaccttgaaggcattggcgtca
aaaaaccgtgtactgaagtctttgatcggtcagggttattacaacacgcatacgccgggc
gttatcctgcgcaatatctttgaaaaccctggctggtataccgcttacacaccataccag
ccagagatttcccagggccgcctggaagcaatcctgaacttccagcaagtcatcactgac
ctgactggcatggacatcgccaatgcatcgatgcttgacgaaggcacggctgcagctgaa
gccatgacgctgatacagcgcgtaggcaaatccaaatccaatgtgttttatgtcgctgcc
gatgtcttgccacaaacccgagaaatcatagaaacccgcgccaagccgctgggcatagaa
gtgcgtacctgcgctggtaatgaagcgctggacaatgattgctttggcgtcttgctgcaa
tacccgggcgttgatggttccatcgttgattaccgcgaatatgcggcagccttgcatgcc
aagggtgcaatggttatcgctgctgccgatttgctggcactgacactgatcgcttcccca
ggcgagtggggtgctgacgttgttgttggtaacagccagcgttttggcgtaccgctgggt
tttggtggcccgcacgcaggttatatgggtacacgcgatgcattcaaacgcagcatgcca
ggtcgtctggttggcgtgacgattgatgcgcaaggtaacaaggcttatcgcctggccctg
caaacacgtgaacagcatatccgccgcgaaaaagccacatcgaatatctgtaccgctcag
gtgttgctggcagtgattgcttccatgtatgctgtttatcacggccctgcaggcttgcgc
cagatcgccttgcgcgtacaccgtctgactggtgttctggctggcggcctcaagcaacaa
ggtctgactatcgcgaacaccacttattttgacactctgacagtcaatgtcgccaatgcg
gcggcataccatcaggctgctgaagctgctggctacaacctgcgccagatcagcgcaaca
caggtcggcgtttctctggatgaaacagtgacacgtgccgatgttgaagccctgtgggcg
atttttgccaaggcaagcggcgtaactacagcgccagattttgcagcgatagaagcaggc
gtcaatgatgcctatcctgcggcactgacacgtggcacgacttatctgacgcacccaacc
ttcaaccgctatcacgcagaacatgaaatgctgcgttacctgcgcagcctcgctgacaaa
gatctggcgctggaccgcaccatgataccgctgggttcatgcacgatgaagttgaatgcc
accagcgaaatgatcccggtcacttggcctgaattctccagcatccatccatttgcgcca
aatgaccagaccatcggttaccgcgaaatgatcgctcaactcgaagccatgttgtgcgca
gcaactggctacgacgccgtatccctgcaaccaaatgccggttcgcaaggtgaatatgct
ggcttgctggtgatccaggcttaccacgcgtcccgtggtgaagcacaccgcaatatctgc
ctgatcccatcttctgcacacggcaccaatccagcatccgccagcatggtaggcatggat
gtggttgtggttgcttgcgatgacaagggcaacgttgatctggctgatctgcaagccaag
gcagaaaaacacagtgccaacctggcagcagcgatggtgacttatccatccacgcatggt
gtgtttgaagaaggcatacagcaactgtgcgaaatcgtgcatagccacggtggccaggtc
tatgttgacggcgcgaacatgaatgcactggttggcgttgcggcaccaggcaagtttggt
ggtgatgtcagccatctgaacctgcacaagactttctgtatccctcacggcggtggcggc
ccaggcgtaggcccggttgctgttggtgcgcatctggcgaagttcttgcctaaccagaaa
tccaccggttatgtacgtggtgaagatggcatctctgccgttagcgcagcaccatttggc
tctgccagcattttgcctatctcttggatgtacatcgccatgatgggtgcagaaggcttg
aaggcagcgacagaaacagcgattctggcagcgaactacatcgccaaacgcctggccccg
cattaccctgtgctgtacagcggtcatgatggcctggttgcgcatgagtgtattctggat
ctgcgtccattgaccgatgccaccggcatttccaatgaagacgtggccaagcgcctcatc
gactttggtttccatgcaccgaccatgagcttccctgtgcctggcaccttgatgatagaa
ccgacagaaagcgaatcccaggctgaactcgaccgcttcatcgatgccatgatcagcata
cgcgaagaaatcgccaaggtagccagtggtgaatttgatgccaaagacaatccgctgaaa
catgcaccacatacagcggaggtactgattgccaatgagtggtcacatgcttacagccgt
gaagtggcagcttatccagtagcttcgctgcgcaagaataaatattttgcgccagttggc
cgtgctgacaatgtctatggtgaccgcaatctgttctgctcttgcataccagtcagcgat
tacgaataa
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