Undibacterium sp. YM2: UNDYM_3364
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Entry
UNDYM_3364 CDS
T10101
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
uny Undibacterium sp. YM2
Pathway
uny03030
DNA replication
uny03430
Mismatch repair
uny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UNDYM_3364 (dnaE)
03430 Mismatch repair
UNDYM_3364 (dnaE)
03440 Homologous recombination
UNDYM_3364 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uny03032
]
UNDYM_3364 (dnaE)
03400 DNA repair and recombination proteins [BR:
uny03400
]
UNDYM_3364 (dnaE)
Enzymes [BR:
uny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UNDYM_3364 (dnaE)
DNA replication proteins [BR:
uny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UNDYM_3364 (dnaE)
DNA repair and recombination proteins [BR:
uny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UNDYM_3364 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Mrr_cat
P63C
Kinetochor_Ybp2
Motif
Other DBs
NCBI-ProteinID:
BBB67617
UniProt:
A0A809QLF6
LinkDB
All DBs
Position
complement(3729470..3732988)
Genome browser
AA seq
1172 aa
AA seq
DB search
MTTELITSPEASNEVAVSKPYEPAFVHLRIHSEYSIVDGLVRIDDVIKAAVKDKQPAMAI
TDLANLFAMVKFYKSARGKGMKPIAGCDVWISNDVDRDKPSRLLLLVKNKLGYLQLCELL
AQAWLTNQHKGKAEIRFEWLQKIFEEGQGGGLIAISGAHFGDVGVAIDNGNLELAEQNAR
RWASIFPNHFYIEIQRAGQANMDNHVRAAVALAGRLKLPVVATHPVQFISKDDYTAHEAR
VCIAEGDMLANGRRVRRFNEQQCFKTQAEMAELFADLPAALRNSVEIAKRCNLTLELGKP
KLPDFPTPEGMTINDFLEHESRRGLEFRLNQIFPNEEKREKERARYEARLKFETDTIIKM
GFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVAYSLLITDLDPLQYNLLFERFLNPE
RVSMPDFDIDFCQEGRDKVIQYVKDRYGKEAVSQIATFGTMAAKGAIRDIGRVLDFGYMF
CDGVSKLIPFKPGKQVTIAEAIVEEPLLAERQENEEEVKTLLDLAQQVEGITRNIGMHAG
GVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIK
MMDPAMADFDLAKLPLDDRASYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALV
ALYRPGPMDLIPDFCKRKHGEKFDYPDPRTEGILSETYGIMVYQEQVMQMAQVVGGYSLG
GADLLRRAMGKKKAEEMAEHRQIFRDGAAKDGLPQEKADEIFDLMEKFAGYGFNKSHAAA
YALLSYHTAYLKAHHAAAFMAANMSLAMDDTDKVKILVEDAIDICKLKMLPPDINLSDYR
FMPVAEPGKKSSQIRYGMGAVKGSGQNAIESIITARKEGGPFKDLFDFCKRVDKRQVNRR
TVESLIRAGAMDCLGKDRGVLLATVDFALEAAMQAEAAANQVSLFGDDDDLIAPPDYLDV
PPWTDKKRLTEEKLALGFYLSGHLFDSYAPEVRQFIKTTLAKLEPSRDLRLICGIITGVR
TQMTQRGKLLIVSLDDGTAVVEVTVYSELMEEFKSLFKEDEFLAVLGKVSEDRFSGGLRI
SAEKVMDIGRARVQFSQGLRLTLTSTADTKKLQEMLKPHLNADGCPVLIRYQNANASAEM
YLSDQWRVNPDDVLRQNLGEWLSMKNVKIEYA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgactacagaattaattacctcccctgaagcgagcaatgaagttgccgtcagcaagccc
tacgagcctgcctttgtccatctgcgcatccactctgaatattcgatagtcgatggcctg
gtgcgtattgatgatgtcatcaaggcagcagtaaaagacaaacagccagcaatggcaatt
actgacctggcgaatttgttcgccatggtgaaattctataaatctgcacgcggcaagggc
atgaagcctatcgccggttgcgatgtgtggatcagcaatgatgtcgatcgtgacaagcca
tccagattgcttttgctggtcaagaacaaacttggctatttgcagttatgtgaattgctg
gctcaggcctggctgactaaccagcacaagggcaaggcggaaattcgttttgaatggctg
caaaaaatctttgaagaaggtcagggcggtggcctgatcgccatctctggcgcacatttt
ggcgatgtcggcgttgctattgataatggcaatctggaactggcagagcaaaacgccaga
cgctgggccagcatttttcccaaccatttttatatagaaatacaaagagcaggccaggca
aacatggataaccatgtgcgcgctgccgtggccctggcgggcaggctcaaattgccggtg
gtggcaacccatcccgtgcaattcatcagcaaggacgactacaccgcccatgaagcacgc
gtttgtattgccgaaggtgatatgctggccaatggccgccgcgtgcgcaggttcaatgag
cagcaatgcttcaagacccaggccgagatggcagagctgtttgccgacttgccagcagcc
ttgcgcaattctgtcgaaatcgccaagcgctgtaacctgacgctggaactgggtaagccg
aagctgccggattttccaacgcctgagggcatgaccatcaatgactttttggaacatgaa
tcccggcgcggtcttgagttccgcctcaatcaaattttcccgaatgaagaaaagcgcgag
aaagagcgcgcccgttatgaggcgcgcctgaagtttgaaaccgacaccattatcaagatg
ggtttcccgggttacttcctcattgttgctgactttatccagtgggccaagaacaatggc
gtgccggtagggccgggccgtggttctggtgccggttccctggttgcgtattcattgctg
attaccgatcttgatcctttgcagtacaacctgctgttcgagcgtttcctgaacccggag
cgggtatccatgcccgactttgatattgacttttgccaggaaggccgcgacaaggttatt
cagtacgtgaaagaccgttatggcaaagaagcggtatcgcagattgccaccttcggtacc
atggctgccaagggcgcgatacgtgacatcggccgcgtgctggactttggctacatgttc
tgcgatggcgtctccaaactgatcccgttcaaaccgggcaaacaagtcacgatagccgag
gcaatcgtggaagaacccttgctggctgagcgtcaggaaaacgaagaagaagtcaaaacc
ctgctcgacctggcgcaacaggtagaaggcatcacccgtaatattggtatgcatgccggt
ggtgtattgattgccccaggcaagctgacagatttttgcccgctgtacacccagggcggc
gattctggcgtggtgtcgcaatatgataaagacgacgtcgaggctgtgggcctggtcaag
ttcgactttttgggtttgaccaccttgaccattctcgacagggcagtgcgctatatcaag
atgatggacccggccatggcagattttgatctggccaaattgccgctggatgacagggca
tcttatgatttactgaccaaggccaagaccgtggctgtgttccagctggaaagccgcggc
atgcaaggcatgctgaaagatgcgcgtcctgaccgctttgaagacattatcgcgctggtg
gctttgtaccgccctggccctatggacctgatcccggatttctgcaaacgcaagcacggt
gagaaattcgattatcctgatccccgtaccgaaggcattttgtctgaaacctacggcatc
atggtgtatcaggaacaggttatgcagatggcccaggtggtcggtggctactcactcggc
ggtgccgatttgctgcgccgtgccatgggtaagaaaaaagcagaagagatggccgagcat
cgccagattttccgtgatggtgcagccaaggatggtttgccgcaagaaaaagccgacgag
attttcgatttgatggaaaaattcgcgggctatggttttaataaatcccatgctgccgcg
tatgccttgctgtcttaccacaccgcttatctgaaagcgcatcacgctgctgccttcatg
gcagccaatatgtcgctggccatggatgataccgataaggtcaagattctggtcgaagat
gcgattgatatctgcaagctcaaaatgctgccgccagatatcaatctgtccgattatcgt
ttcatgccagttgctgaacctggcaaaaaatccagccagatacgctatggcatgggcgcc
gtcaaaggctcaggccagaatgcgatagaaagcatcatcacggccagaaaagaaggtggg
ccatttaaggatttgtttgatttctgcaaacgcgtcgataaacgccaggtgaaccgccgt
acggtagagtccctgatacgtgccggtgccatggattgcctgggcaaagaccgtggcgtc
ttgctggcaaccgtcgattttgcgctggaagcagcgatgcaggcagaagccgcagcaaac
caggtcagcctgtttggtgatgacgatgatttgatcgcgccaccagattacctggatgta
ccgccgtggacagacaagaagcgcctgaccgaagaaaaactggcgctgggcttttacctg
tccggtcatctgtttgattcttatgcgccagaagtgcgccagttcatcaagaccactctt
gccaagctggaaccttcacgcgatttgcgcctgatttgcggcatcattaccggtgtgcgc
acccagatgacacagcgcggcaagctactcatcgtcagccttgatgatggcactgccgtg
gttgaggtgacggtgtatagcgaactcatggaagagttcaaatccctgttcaaggaagat
gaattcctggctgtgctgggcaaagtgtctgaggacaggttctcaggcggcttgcgtatc
tcggctgaaaaagtcatggatataggccgcgcccgcgtacagttctcgcaaggtttgcgc
ctgacgttgacatcgacagcagacaccaaaaagctgcaagagatgctgaagccacatttg
aacgccgatggttgcccggtattgatacgctatcaaaacgccaatgccagtgctgaaatg
tatttgtcagaccagtggcgggtgaacccggatgatgtcttgcggcagaacctgggcgaa
tggctatccatgaaaaacgtcaaaattgaatacgcctga
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