Undibacterium sp. YM2: UNDYM_3480
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Entry
UNDYM_3480 CDS
T10101
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
uny Undibacterium sp. YM2
Pathway
uny00061
Fatty acid biosynthesis
uny00071
Fatty acid degradation
uny01100
Metabolic pathways
uny01212
Fatty acid metabolism
uny02024
Quorum sensing
uny04146
Peroxisome
Module
uny_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
UNDYM_3480 (fadD)
00071 Fatty acid degradation
UNDYM_3480 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
UNDYM_3480 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
UNDYM_3480 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
uny01004
]
UNDYM_3480 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
uny04147
]
UNDYM_3480 (fadD)
Enzymes [BR:
uny01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
UNDYM_3480 (fadD)
Lipid biosynthesis proteins [BR:
uny01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
UNDYM_3480 (fadD)
Exosome [BR:
uny04147
]
Exosomal proteins
Exosomal proteins of breast milk
UNDYM_3480 (fadD)
Exosomal proteins of breast cancer cells
UNDYM_3480 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BBB67733
UniProt:
A0A809PN31
LinkDB
All DBs
Position
3857738..3859432
Genome browser
AA seq
564 aa
AA seq
DB search
MEKFWLQSYPQGVPAEIDYTQYTSLVHLLEESFQKYADRKAYVCMDKYLSYAEVDDLSKK
FGAWLQNRGLEKGARVAIMMPNILQYPVVIAAVLRAGYTAVNVNPLYTPRELEHQLNDSG
AEAIVILENFATTLQQVLSKTRIKHVVVTSMGDLMGGVKGMVVNFAVRHIKKMVPEFSLP
TAISFKQALADGSRLQLQAVKLTHDDIAFLQYTGGTTGVSKGAVLTHRNVTANVLQNEAW
AQPALNKAPRVEAMTIVCALPLYHIFALTSCYLMGMRLGGMNILIPNPRDIPGLVKTLSQ
HQISMLPAVNTLYNGLLNNADFAKLDFSLLKACNGGGTAVQPAVAERWKKVTGCAIIEGY
GMSETSPVATCNPADSDDFSGTIGLPLPSTEIAILDDHGNRVPLGESGEIAIRGPQVMQG
YWNRADETAKVMTADGFFKSGDIGIMEANGFIRVVDRKKDMILVSGFNVYPNEIEGVVAS
HPGVLECACVGVPDDNSGEAVKLYVVKKDAKLTDEILMSYCKEQLTSYKKPKYIEFRTEL
PKSNVGKILRRELRDEKKEEKKAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagttttggctgcaatcctatccccagggtgtacccgcagaaatcgactacacc
caatacacctccctcgtgcatctgctggaagagtctttccagaaatacgctgaccgcaaa
gcctatgtctgcatggacaaatacctgagctatgcagaagtggatgacttgtcgaaaaaa
tttggcgcatggctgcaaaaccggggcctggaaaaaggcgcgcgcgttgccatcatgatg
cctaacatcctgcaataccccgtcgttatcgctgcagtcttgcgcgcaggctataccgcc
gtcaacgtcaaccctttatatacaccgcgtgaacttgagcatcaattgaatgactctggt
gctgaagccatcgtcatccttgagaactttgccactaccctgcagcaggtactcagcaaa
acccgcatcaagcatgtcgtcgtaaccagcatgggtgacctcatgggtggagtcaaaggc
atggtcgtcaattttgccgtgcgccatatcaagaaaatggtgccggaattctcactcccg
actgcgatcagcttcaaacaggcactggcagatggttcacgcctgcaactgcaggcagta
aagctcacacatgacgatatcgccttcctgcaatatacaggcggcactaccggtgtatcc
aagggtgcggtgctgacacaccgtaatgtcactgccaatgtcctgcaaaatgaagcatgg
gcacaacctgcgctgaacaaggcacccagggtagaagccatgaccatcgtctgcgccctg
cccctgtatcatatctttgcactgaccagttgctacctcatgggcatgcgcctgggtggc
atgaatatcctgatcccgaatccgcgtgatattcctggcctggtcaagaccttgtcacaa
caccagatcagcatgctgcccgccgtcaataccctgtacaacggcttgctgaataatgcc
gattttgccaagctggatttttcgttgctgaaggcctgcaatggtggcggtacggcagtg
cagcccgcagtggcagagcgttggaaaaaagtgacgggctgcgccatcatagaaggctat
ggcatgtcagaaacttcaccagtagcaacctgcaatccggcagattcagacgattttagc
ggcaccataggcctgcccctgccatcgacagaaatcgccatacttgatgatcatggcaac
cgcgtgcctttgggtgagtcgggtgaaattgcgatacgtggcccgcaagtcatgcagggt
tattggaaccgtgctgacgaaactgccaaggtcatgacggctgacggatttttcaaatcc
ggtgacattggcatcatggaagcaaatggctttatccgcgtcgtagatcgcaagaaagac
atgatcctggtgtccggctttaatgtctatccaaatgaaatcgaaggagtcgtcgccagt
cacccgggcgtactggaatgtgcatgcgtaggtgtgccagatgacaattcaggcgaagct
gtcaaattatacgtcgtcaagaaagatgcgaaattgacggatgaaatattgatgagctac
tgcaaggagcaactgacttcctacaaaaaacccaagtacatagaattccgtaccgagctg
ccaaagtccaacgtaggcaaaatcttgcgacgcgaattaagggatgaaaagaaggaagaa
aagaaagcagcctga
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