Undibacterium sp. YM2: UNDYM_3666
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Entry
UNDYM_3666 CDS
T10101
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
uny Undibacterium sp. YM2
Pathway
uny03018
RNA degradation
Brite
Enzymes [BR:
uny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UNDYM_3666 (recQ)
Messenger RNA biogenesis [BR:
uny03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UNDYM_3666 (recQ)
DNA repair and recombination proteins [BR:
uny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UNDYM_3666 (recQ)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BBB67919
UniProt:
A0A809PNL2
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Position
4075680..4077545
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AA seq
621 aa
AA seq
DB search
MTTAVTAGYTHTNTGSNTVDQALHVLQTVFGYPAFRSQQGQIVEHVVNGGDALVLMPTGG
GKSLCYQIPALLRSGVGIVVSPLIALMQDQVDALAEVGVRAAFLNSTQSFDEILAVEKKM
REGDIDLVYIAPERLLTQRCLELLQVVNIALFAIDEAHCVSQWGHDFRPEYIKLSALHER
FPNVPRIALTATADQQTRDEIIHRLQLENAMQFVSSFDRPNIRYQIVEKANGRKQLLDFI
MAQHSGDAGIVYCLSRKKVEETSEFLNENGITSLPYHAGMELADRSRNQARFLREDGIVM
CATIAFGMGIDKPDVRFVAHLDLPKSIEGYYQETGRAGRDGASANAWMAYGLQDVVQQRR
MIDESEANETYKRVQSVKLEAMLALCETLNCRRTHILEYFGQAAQPCGNCDTCISPPSSF
DGSVAAQKILSTIYRVDQRFAAGHVIDILRGIDTERVQQWRHEKLSTYGIGSDKSEAEWR
ALLRQLIALGLVAVDYENYSSLKLTEASRAVLRGEIKVQLRQYKKAEKAVKHKRQSAKDF
AESDLDSAAQTVFDKLRWWRVETARTHNVPAYVIFPDATLREIARQQPATLPALRAISGV
GDKKLESYGKEIIELIEELRA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacagcagtgaccgcgggctatacgcatacaaataccggcagcaatacggtagat
caggccctgcacgtattgcagactgtctttggctacccggccttccgctcccagcaaggg
caaatcgtcgagcatgtcgtcaatggcggcgatgccctggtgctgatgcccacgggcggc
ggcaagtctctgtgctaccagataccggccctgttgcgcagtggtgtaggcatcgtcgtg
tcccccctgatcgccctcatgcaagaccaggttgatgccctggccgaggtaggtgtacgg
gccgcttttttgaactctacccagagctttgatgaaatcctcgcagtagaaaagaaaatg
cgcgaaggcgatatcgacctcgtgtatatcgcaccggaacgcctgctgacccagcgctgc
cttgagttgctgcaagtcgtcaacattgccctgtttgcgattgatgaggcgcactgcgtc
tcgcaatggggccacgatttccgcccggaatacatcaagctgtcggctttgcatgaacgc
ttcccgaatgtgccgcgcattgccctgacagccacggctgaccagcaaacccgcgatgaa
atcatccatcgcctgcaactcgaaaacgcgatgcagttcgtgtcgtcttttgaccgcccg
aatatccgctaccagatcgtcgaaaaagccaatggccgcaagcaactgctggacttcatc
atggcccagcacagcggtgatgctggcatcgtgtattgcctgtcccgcaaaaaggttgaa
gaaacatctgagttcctgaacgaaaatggcatcacctccctgccctatcatgcgggtatg
gagctggctgaccgcagccgcaaccaggcgcgcttcctgcgtgaagatggtatcgtcatg
tgcgccaccattgcctttggcatgggcatagacaaacccgatgtgcgttttgtcgcccat
ctggatttaccaaaaagcatagaaggctattaccaggaaactggccgtgctggccgcgat
ggtgccagcgccaatgcctggatggcctatggcttgcaggacgttgtacagcagcgccgc
atgatcgacgagtcagaagccaatgagacttacaagcgcgtgcaaagcgtcaagctcgaa
gccatgctggccctgtgcgaaaccctgaattgccgccgtacccacatactggaatatttc
ggccaggccgcccagccctgcggcaattgcgatacctgcatcagcccgcccagttcattt
gacggcagtgtggctgcgcaaaaaatactgtccaccatttaccgtgtagaccagcgtttt
gccgccggccatgtcatcgacatcctgcgcggcattgataccgagcgtgtgcagcaatgg
cggcatgaaaaactctctacttacggcataggttccgacaagagcgaagctgaatggcgc
gccttgttacgccagttgatcgccctcggcctggttgccgtcgattatgaaaactatagc
tcgctaaaactgaccgaagcatcccgcgccgtactacgcggcgaaatcaaggtccagttg
cgccagtacaaaaaagctgaaaaagccgtcaaacacaaacgccagtccgccaaggatttt
gctgagtctgacctcgacagcgcggcacagaccgtctttgacaaactgcgctggtggcgc
gtagaaaccgcacgcacccacaacgtaccagcctacgtcatcttccccgacgccaccctg
cgcgaaatcgcccgccagcaacccgccaccctgcctgctttgcgggcgatatccggtgtc
ggtgacaagaagctggaaagttacggtaaagagattattgagttgatagaagagctgcgc
gcttga
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