KEGG   Undibacterium sp. YM2: UNDYM_4493
Entry
UNDYM_4493        CDS       T10101                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
uny  Undibacterium sp. YM2
Pathway
uny03030  DNA replication
uny03410  Base excision repair
uny03420  Nucleotide excision repair
uny03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:uny00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UNDYM_4493 (polA)
   03410 Base excision repair
    UNDYM_4493 (polA)
   03420 Nucleotide excision repair
    UNDYM_4493 (polA)
   03440 Homologous recombination
    UNDYM_4493 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:uny03032]
    UNDYM_4493 (polA)
   03400 DNA repair and recombination proteins [BR:uny03400]
    UNDYM_4493 (polA)
Enzymes [BR:uny01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     UNDYM_4493 (polA)
DNA replication proteins [BR:uny03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     UNDYM_4493 (polA)
DNA repair and recombination proteins [BR:uny03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     UNDYM_4493 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     UNDYM_4493 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: BBB68746
UniProt: A0A809QS81
LinkDB
Position
complement(4909154..4911940)
AA seq 928 aa
MQNTLLLVDGSSYLYRAFHALPDLRNAQGEPTGAIHGMINMLRRLRTDYPAAYIACVFDA
KGKTFRDDLYPEYKAQRPSMPDDLRLQIEPIHVAVKAMGWPILMVEGVEADDVIGTLAVE
ATKLGMNTIVSTGDKDLAQLVNANVTLINTMSNEKLDEPGVLAKFGVPPDRIIDYLTLIG
DTVDNVPGVAKCGPKTAVKWLTEYDSLDGVIANADKIKGVVGDNLRSALEWLPQGRVLIT
VKTDCDLTGHYTSIQDSLVAKEEDKTELVGFASRWGFKTWLRELTGDATAGATPLPAAKA
ATSGSNSVQAGLFNDDAADADKPAVPVQQNYETVLTEAALDEWLARINAAKLTSVDTETT
SLEPMTAQLVGISLCCEVGHAAYIPVGHNYPGAPEQLSLAVVLGKMKAWLEDDSKPKVGQ
NLKYDSHIFANQGVNLRGIAHDTLLESYVFESHKSHDMDSLAMRHLGKKTISFEEVCGKG
ASQIGFNQVDLERATAYAAEDADITLQLHLAMWPEIEPDANLLRVYHDIELPTSVVLQKI
ERNGVHINKDLLEAQSHEIGIRLLELEQKAYELAEQPFNLNSPKQLGEIFFGKLGLPVVK
KTPSGAPSTDEEVLQKLAEDYPLPKVLLEYRGLAKLKSTYTDKLPKMVNASTGRVHTNYA
QAVAVTGRLASNDPNLQNIPVRTAEGRRIREAFVAGPGNVIISADYSQIELRIMAHISGD
ASLLAAFANGEDIHRATASEIFAVPLTEVTSEQRRYAKVINFGLIYGMSAFGLAGNLGIE
RSAAQSYIDKYFQRYPGVAQYMADTRTKAKAHGYVETVFGRRLWLAEINSPNGPRRAGAE
RAAINAPMQGTAADLIKLAMIAVQGWLETDKLQSKMIMQVHDELVLEVPQAELELVKQKL
PELMANVAKLDVPLLAEVGVGGNWEEAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgcaaaatactctcttgttagttgatggctctagctatctgtaccgcgccttccatgct
ctgcccgacttgcgcaatgcacaaggagaaccaactggcgccatacacggcatgatcaat
atgttacgccgtttgcgtacggattacccggcagcatacatcgcctgtgtgtttgatgcc
aaaggcaaaaccttccgcgatgatctctaccccgagtacaaggctcagcggccctccatg
ccagacgacctgcgcctgcagatagaacccatacacgtcgccgtcaaggccatgggctgg
cctatcctgatggtcgaaggggtagaggctgatgatgtcatcggcacgctggcagtagaa
gccaccaagctgggcatgaacaccatcgtctctaccggcgacaaagacctggcccaactc
gttaatgccaatgtcaccctgatcaacaccatgagcaatgaaaagctcgacgaacccggt
gtattggccaaatttggcgtgccgcccgaccgcatcatcgattacctgacactgataggt
gacaccgtcgataacgtgcctggtgttgccaaatgcggccccaagactgccgtcaaatgg
ctgacagaatacgatagcctggatggcgtcatcgccaacgccgacaagatcaagggcgtg
gtcggcgacaacctgcgcagtgcgctggaatggctgccacaaggccgcgtgctgatcacc
gtcaaaactgattgtgacctcaccggacattacacctcgatacaggacagcctggtcgcg
aaagaagaagacaagaccgagctggttggctttgccagccgctggggcttcaagacctgg
ttgcgcgaattgactggtgacgccaccgcgggcgcgacaccgctgcccgctgccaaagcc
gccaccagtggcagcaattctgtacaggctgggctgttcaatgatgatgcagcagatgct
gacaagccagccgtgccagttcagcagaactatgaaaccgtattgaccgaagccgcactc
gatgaatggctggcccgcatcaatgccgccaaactgacctcggtagataccgaaaccact
tcgctggaacccatgacggcgcaactggttggtatttcgctgtgttgcgaagtcggccat
gcggcttatatccccgtcggccataactaccccggcgcacctgagcaattgtcgctggcg
gtggtgctgggcaagatgaaagcctggctagaagacgacagcaaacccaaggttggccaa
aacctcaaatacgacagccatatcttcgccaaccagggcgtgaacctgcgcggtatcgcg
catgacaccctgcttgaatcctatgtttttgaatcgcacaaatcgcatgacatggacagc
ctggccatgcgccacctcggcaagaaaaccatcagctttgaagaagtctgcggcaagggt
gcaagccagataggctttaatcaggtcgacctggaacgcgcgactgcctatgccgcagaa
gatgccgacatcaccctgcaactgcacctcgccatgtggccagagatagagccggacgcg
aacctgctgcgcgtctaccacgacatagaactgcccacctcggttgtcttgcaaaagata
gagcgcaacggcgtacacatcaataaagacctgctcgaagcgcagtcgcatgaaatcggc
atacgcctgctggaactcgaacaaaaggcctacgagctggcagagcagcctttcaatttg
aactcacccaaacaactgggcgagattttctttggcaaactgggcctgcctgtcgtcaag
aaaactccatccggtgcaccatcgacggatgaagaagtcttgcaaaaactggctgaggat
tatcccctgcccaaggtcttgctcgaataccgaggcctggcaaaactcaaatcgacttac
accgacaaactgcccaagatggtcaacgccagcacaggccgcgtccacaccaattatgcg
caagccgtagctgtcactggccgcctcgcatcgaatgaccctaacctgcaaaacatcccc
gtgcgcactgcagaaggccgccgcatacgcgaagcctttgtggccgggcctggcaatgtc
atcatctctgccgactattcgcaaatcgaattgcgtatcatggcccacatctctggtgac
gccagcctgctggccgcctttgccaatggcgaagacatccaccgcgccactgcctccgag
atttttgccgtaccactgacagaagtaacgagcgagcagcgccgctatgccaaggtcatc
aactttggcctcatctatggcatgagcgcctttggcctcgcaggcaacctcggcatagaa
cgcagcgcagcgcaaagctatatcgacaaatacttccagcgctaccctggtgtcgcccaa
tacatggcagacacccgcaccaaggccaaagcccacggctatgtagaaaccgtcttcggc
cgccgcctgtggctggcagaaatcaactcccccaacggcccccgccgcgctggtgcagaa
cgcgcggcgatcaacgcccccatgcagggtaccgccgccgacctcatcaaactcgccatg
atagccgtacaaggctggctggaaacagacaaactgcaatcaaaaatgatcatgcaggtg
cacgatgaactggtactcgaagtaccgcaagctgagctggaactggtcaagcaaaaattg
ccagagttgatggcgaatgtggcgaagctggatgtgcctttgcttgctgaagttggcgtg
ggcgggaattgggaagaggcgcattga

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