Undibacterium sp. YM2: UNDYM_4493
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Entry
UNDYM_4493 CDS
T10101
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
uny Undibacterium sp. YM2
Pathway
uny03030
DNA replication
uny03410
Base excision repair
uny03420
Nucleotide excision repair
uny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UNDYM_4493 (polA)
03410 Base excision repair
UNDYM_4493 (polA)
03420 Nucleotide excision repair
UNDYM_4493 (polA)
03440 Homologous recombination
UNDYM_4493 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uny03032
]
UNDYM_4493 (polA)
03400 DNA repair and recombination proteins [BR:
uny03400
]
UNDYM_4493 (polA)
Enzymes [BR:
uny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UNDYM_4493 (polA)
DNA replication proteins [BR:
uny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
UNDYM_4493 (polA)
DNA repair and recombination proteins [BR:
uny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
UNDYM_4493 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UNDYM_4493 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BBB68746
UniProt:
A0A809QS81
LinkDB
All DBs
Position
complement(4909154..4911940)
Genome browser
AA seq
928 aa
AA seq
DB search
MQNTLLLVDGSSYLYRAFHALPDLRNAQGEPTGAIHGMINMLRRLRTDYPAAYIACVFDA
KGKTFRDDLYPEYKAQRPSMPDDLRLQIEPIHVAVKAMGWPILMVEGVEADDVIGTLAVE
ATKLGMNTIVSTGDKDLAQLVNANVTLINTMSNEKLDEPGVLAKFGVPPDRIIDYLTLIG
DTVDNVPGVAKCGPKTAVKWLTEYDSLDGVIANADKIKGVVGDNLRSALEWLPQGRVLIT
VKTDCDLTGHYTSIQDSLVAKEEDKTELVGFASRWGFKTWLRELTGDATAGATPLPAAKA
ATSGSNSVQAGLFNDDAADADKPAVPVQQNYETVLTEAALDEWLARINAAKLTSVDTETT
SLEPMTAQLVGISLCCEVGHAAYIPVGHNYPGAPEQLSLAVVLGKMKAWLEDDSKPKVGQ
NLKYDSHIFANQGVNLRGIAHDTLLESYVFESHKSHDMDSLAMRHLGKKTISFEEVCGKG
ASQIGFNQVDLERATAYAAEDADITLQLHLAMWPEIEPDANLLRVYHDIELPTSVVLQKI
ERNGVHINKDLLEAQSHEIGIRLLELEQKAYELAEQPFNLNSPKQLGEIFFGKLGLPVVK
KTPSGAPSTDEEVLQKLAEDYPLPKVLLEYRGLAKLKSTYTDKLPKMVNASTGRVHTNYA
QAVAVTGRLASNDPNLQNIPVRTAEGRRIREAFVAGPGNVIISADYSQIELRIMAHISGD
ASLLAAFANGEDIHRATASEIFAVPLTEVTSEQRRYAKVINFGLIYGMSAFGLAGNLGIE
RSAAQSYIDKYFQRYPGVAQYMADTRTKAKAHGYVETVFGRRLWLAEINSPNGPRRAGAE
RAAINAPMQGTAADLIKLAMIAVQGWLETDKLQSKMIMQVHDELVLEVPQAELELVKQKL
PELMANVAKLDVPLLAEVGVGGNWEEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatactctcttgttagttgatggctctagctatctgtaccgcgccttccatgct
ctgcccgacttgcgcaatgcacaaggagaaccaactggcgccatacacggcatgatcaat
atgttacgccgtttgcgtacggattacccggcagcatacatcgcctgtgtgtttgatgcc
aaaggcaaaaccttccgcgatgatctctaccccgagtacaaggctcagcggccctccatg
ccagacgacctgcgcctgcagatagaacccatacacgtcgccgtcaaggccatgggctgg
cctatcctgatggtcgaaggggtagaggctgatgatgtcatcggcacgctggcagtagaa
gccaccaagctgggcatgaacaccatcgtctctaccggcgacaaagacctggcccaactc
gttaatgccaatgtcaccctgatcaacaccatgagcaatgaaaagctcgacgaacccggt
gtattggccaaatttggcgtgccgcccgaccgcatcatcgattacctgacactgataggt
gacaccgtcgataacgtgcctggtgttgccaaatgcggccccaagactgccgtcaaatgg
ctgacagaatacgatagcctggatggcgtcatcgccaacgccgacaagatcaagggcgtg
gtcggcgacaacctgcgcagtgcgctggaatggctgccacaaggccgcgtgctgatcacc
gtcaaaactgattgtgacctcaccggacattacacctcgatacaggacagcctggtcgcg
aaagaagaagacaagaccgagctggttggctttgccagccgctggggcttcaagacctgg
ttgcgcgaattgactggtgacgccaccgcgggcgcgacaccgctgcccgctgccaaagcc
gccaccagtggcagcaattctgtacaggctgggctgttcaatgatgatgcagcagatgct
gacaagccagccgtgccagttcagcagaactatgaaaccgtattgaccgaagccgcactc
gatgaatggctggcccgcatcaatgccgccaaactgacctcggtagataccgaaaccact
tcgctggaacccatgacggcgcaactggttggtatttcgctgtgttgcgaagtcggccat
gcggcttatatccccgtcggccataactaccccggcgcacctgagcaattgtcgctggcg
gtggtgctgggcaagatgaaagcctggctagaagacgacagcaaacccaaggttggccaa
aacctcaaatacgacagccatatcttcgccaaccagggcgtgaacctgcgcggtatcgcg
catgacaccctgcttgaatcctatgtttttgaatcgcacaaatcgcatgacatggacagc
ctggccatgcgccacctcggcaagaaaaccatcagctttgaagaagtctgcggcaagggt
gcaagccagataggctttaatcaggtcgacctggaacgcgcgactgcctatgccgcagaa
gatgccgacatcaccctgcaactgcacctcgccatgtggccagagatagagccggacgcg
aacctgctgcgcgtctaccacgacatagaactgcccacctcggttgtcttgcaaaagata
gagcgcaacggcgtacacatcaataaagacctgctcgaagcgcagtcgcatgaaatcggc
atacgcctgctggaactcgaacaaaaggcctacgagctggcagagcagcctttcaatttg
aactcacccaaacaactgggcgagattttctttggcaaactgggcctgcctgtcgtcaag
aaaactccatccggtgcaccatcgacggatgaagaagtcttgcaaaaactggctgaggat
tatcccctgcccaaggtcttgctcgaataccgaggcctggcaaaactcaaatcgacttac
accgacaaactgcccaagatggtcaacgccagcacaggccgcgtccacaccaattatgcg
caagccgtagctgtcactggccgcctcgcatcgaatgaccctaacctgcaaaacatcccc
gtgcgcactgcagaaggccgccgcatacgcgaagcctttgtggccgggcctggcaatgtc
atcatctctgccgactattcgcaaatcgaattgcgtatcatggcccacatctctggtgac
gccagcctgctggccgcctttgccaatggcgaagacatccaccgcgccactgcctccgag
atttttgccgtaccactgacagaagtaacgagcgagcagcgccgctatgccaaggtcatc
aactttggcctcatctatggcatgagcgcctttggcctcgcaggcaacctcggcatagaa
cgcagcgcagcgcaaagctatatcgacaaatacttccagcgctaccctggtgtcgcccaa
tacatggcagacacccgcaccaaggccaaagcccacggctatgtagaaaccgtcttcggc
cgccgcctgtggctggcagaaatcaactcccccaacggcccccgccgcgctggtgcagaa
cgcgcggcgatcaacgcccccatgcagggtaccgccgccgacctcatcaaactcgccatg
atagccgtacaaggctggctggaaacagacaaactgcaatcaaaaatgatcatgcaggtg
cacgatgaactggtactcgaagtaccgcaagctgagctggaactggtcaagcaaaaattg
ccagagttgatggcgaatgtggcgaagctggatgtgcctttgcttgctgaagttggcgtg
ggcgggaattgggaagaggcgcattga
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