Undibacterium sp. YM2: UNDYM_4505
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Entry
UNDYM_4505 CDS
T10101
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
uny Undibacterium sp. YM2
Brite
Enzymes [BR:
uny01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
UNDYM_4505
Transfer RNA biogenesis [BR:
uny03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
UNDYM_4505
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GFIT
Other DBs
NCBI-ProteinID:
BBB68758
UniProt:
A0A809PUU2
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Position
complement(4920276..4922402)
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AA seq
708 aa
AA seq
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MNLFFEESGDFKAGSIMTHAGEAYQVEMASGKRTKVKAKDVLLQFASPDPASLIEQAKAA
AAEIDLEFLWEVAGQEEFGFAELGTEYFGHAPQPVEAAGLIYALHNAPIYFYKKGRGRYK
AAPEASLKAALAGIEKKKQQALVQAGYVEELKQNRLPEAMKSLALQLLFKPDKNSIEYKA
LAEACDAMQMSPQRLMLAVGGIASPKHLHLARFHYEHFPKGVGFPAITLPALPTDLPVAD
VQAFSIDDVTTTEIDDAFSVVDLGNGQLRVGIHIAAPALGIQRGDAIDQMARGRMSTVYM
PGDKITMLPDELVNVYTLGAGQTRPAVSLYATLNTEDWSVISTETKVEAVPMASNLRHND
LDALVTEDNLANDAGEYPHKADIAQLWKWALVLEQGRMVKRESFGMKPEQNNRVDFNFYV
EDDVVSIVRRKRGAPLDKIVAELMIFANSTWGKLMADHGIPGIYRAQGVAGGRGPGGWTA
RMQVRMLTHAAPHQGLGVDQYAWSTSPLRRYTDLVNQWQIIACVQHGITAPLVATFKPKD
ADLFAIVSGFDAAYAAYADFQNNMERYWCLRWLGQQEQRQVEAVVLKDEVLRLVDIPLII
RLPGMPQTARGAQVRLDILRWDEVDLEVEARLLELLSTVTELEEEELDDETSTEVAEDFS
AEEGAPATETVAEAQSATTEVETEVATELSNELAKDDANTPDEEQPQA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttttcgaagaatccggtgatttcaaggcaggcagcatcatgacgcatgct
ggtgaggcttatcaggttgagatggccagtggcaagcgcacgaaggtgaaagccaaggat
gtgctgctgcaatttgcctcgcccgatcccgccagcctgatagagcaggccaaggccgct
gcggctgagatagacctggaatttctatgggaagtcgccggacaggaagaatttggtttt
gctgaactgggtaccgaatattttggtcatgcaccacaaccggtagaagcagcaggcctc
atctatgcgctgcataacgcccccatttatttctacaaaaaaggccgtggccgttacaag
gctgcgccggaagcatcgctgaaggctgcactggccggtatagaaaagaaaaaacagcaa
gccctggtacaggctggctatgtcgaagaactcaagcaaaaccgcttgccagaggcgatg
aaatcgctggccctgcagctcttgttcaaacccgacaagaacagcatagaatacaaagcc
ttggcagaagcctgcgatgccatgcaaatgtcaccgcaacgcctgatgctggctgtgggt
ggtattgccagccccaagcatttgcacctggccaggtttcattacgagcatttccccaaa
ggcgttggtttcccggcgattaccttgccagccttgcccactgatttgccggtggcagat
gtacaggctttctccatcgatgacgttaccacgactgagattgatgatgccttctctgtc
gttgatcttggcaatggccagttgcgtgtcggcatacacattgccgcgccagccctgggc
atacagcgcggcgatgcgatagaccagatggcacgtggccgcatgtccaccgtgtatatg
cctggcgacaagatcaccatgctgccggatgaacttgtgaatgtctataccctcggtgcc
ggccagacccgcccggccgtatcactgtatgcgaccttgaataccgaggactggtctgtc
atcagcaccgagaccaaggtagaagccgtgcctatggccagcaatctgcgccacaatgac
cttgatgcgctggtgactgaagacaacctagctaatgacgctggtgaatacccgcacaag
gccgatatcgcccaattgtggaaatgggcgctggtgctcgagcagggccgcatggtcaag
cgcgagagctttggcatgaagcccgagcaaaacaatcgcgtcgatttcaatttctatgta
gaagatgatgtcgtctccatcgtgcgccgcaagcgtggtgcgccgctggacaagattgtt
gccgaactgatgatctttgccaacagcacctggggtaagctcatggctgaccatggcatc
cctggcatctaccgcgcccagggtgtggctggtggccgtggccccggcggctggaccgcg
cgcatgcaggtacgcatgctgacccatgcggcaccgcatcaggggctgggtgtcgatcaa
tatgcctggagcacatcgccactgcgccgctatactgacctggtcaatcaatggcagatc
atcgcctgcgtacagcacggcatcaccgcgccgctggtcgctaccttcaaacccaaggat
gcagacttgttcgccatcgtgtcaggctttgatgccgcttatgccgcctatgctgatttc
cagaacaatatggaacgctactggtgcctgcgctggctgggccagcaagagcagcgccag
gtcgaagctgttgttttgaaagacgaagtcttgcgccttgtcgatattccgctcatcatc
cgtttgccgggcatgccgcagacagcacgcggtgcccaggtacgcctggatatcctgcgc
tgggatgaagtcgatcttgaagtcgaagcgcgcctgctggaattgttatctaccgtcacc
gagcttgaggaagaagagctggacgacgaaaccagcactgaagttgcagaagacttcagc
gcagaagaaggcgcacctgcaacagagacagtagcagaggcgcagagcgcgacaacagag
gtggaaactgaggtggcaactgagcttagcaatgagcttgccaaggatgacgcgaatact
ccagacgaagaacagccacaagcctag
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