Undibacterium sp. YM2: UNDYM_4568
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Entry
UNDYM_4568 CDS
T10101
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
uny Undibacterium sp. YM2
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uny03400
]
UNDYM_4568
Enzymes [BR:
uny01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
UNDYM_4568
DNA repair and recombination proteins [BR:
uny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
UNDYM_4568
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBB68821
UniProt:
A0A809R094
LinkDB
All DBs
Position
complement(4985926..4987473)
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AA seq
515 aa
AA seq
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MQSTAPATTLRLILGDQLYPAHSWFSQASDDVVYVMMEIRQETDYVLHHAQKIIAIFAAM
RELAAQLQAAGHRLHYLAIDDADNTQSLTANLDWLLAHYQCSQFEYQEPDEFRLDAQLAA
YCDASKINCRMRSSEHFFTRRDEAAILFEGRKKWLMENFYRHMRVKHQVLLEEANKPVGG
QWNYDHDNRKAWPGIPWEPADFRPRHDHSGLWETIQQAGINSFGEANASNFAWPLNRAEA
LAQLDAFIQHALPHFGEFQDAMSSKSWRLFHSLISFALNVKMLQPQEVVSKVEAALWAGH
AALPAVEGYIRQILGWREYVRGIYWAQMPGYEEHNFFGHEAELPAWFWTGKTKMRCLSSA
ISQSLEQAHAHHIQRLMVIGNFALLAGLQPQQVHRWYLGVYIDAFEWVELPNTLGMSQFA
DGGMLATKPYVSAAAYIDKMSDYCKGCHYDKKQRTSEQACPYNALYWDFFARNEDKLSSN
PRIGMVYPQLRKMDKDVLQALRDRATDIRARLDDL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctactgcacctgcaacgacattgcgcctgatactcggtgaccagctctatcct
gcgcatagctggtttagccaagcttctgacgatgtcgtctatgtcatgatggaaatccgt
caagagacagattacgttctccatcatgcgcaaaaaattatcgccatcttcgccgccatg
cgcgagctggctgcgcaactccaggctgctggccatcgcctgcattatctggctatcgat
gatgcagacaatacgcaatctctgacagccaatcttgactggctgctggcacattaccaa
tgcagtcagtttgaataccaggagcctgatgaattcaggcttgatgcacaactcgccgcc
tattgcgatgccagcaagatcaattgccgcatgcgcagtagtgaacatttttttacccgc
cgtgatgaagccgccatcctgtttgaaggccgcaagaaatggttgatggaaaatttctat
cgccacatgcgggtcaagcaccaggtcttgctggaagaagccaacaaaccagtcggcggg
caatggaattacgaccacgacaaccgcaaagcctggcccggcataccctgggaaccggca
gacttccggccacggcatgatcattcaggcttgtgggaaaccatacagcaggcaggcatc
aatagctttggtgaggcgaacgcgagtaattttgcctggccgctgaatcgagcagaagca
ctggcgcaacttgatgctttcatccagcatgccttgccgcattttggtgagtttcaggat
gccatgagcagcaagtcatggcgcttgtttcattcactgatttctttcgccttgaatgtc
aaaatgctgcagccgcaagaagtggtcagcaaggtagaggcggcactctgggccggccat
gccgcactgcctgcagtagagggctatatacggcagatactgggctggcgagaatatgtg
cgcggcatttactgggcgcaaatgccaggctatgaagaacataatttctttggccatgag
gcagaattaccagcatggttctggactggtaaaacaaaaatgcgttgcctctccagtgcc
atcagccagtcgctggagcaagcccatgcccaccatattcaacgcctgatggtcatcggc
aattttgccttgctggcgggcttgcagccgcagcaagttcatcgctggtacctgggtgtt
tatatcgatgcgtttgagtgggtagaattgcccaatactttgggcatgagccagtttgct
gacggtggtatgctggccaccaaaccctatgtatccgccgcagcctatatcgacaagatg
agtgattattgcaagggctgccattacgataaaaagcaacgtacaagcgaacaagcttgc
ccctacaatgccctgtactgggatttttttgcgcgcaacgaagacaagttatccagtaac
ccccgcataggcatggtatatccgcaactcaggaaaatggataaagacgtcttgcaggcg
ctgcgcgacagggcaacagatatacgtgccaggctcgatgatctttaa
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